|   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | R | N | P | H | F | N | R | M | I | E | Q | I | E | K | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | I | K | S | R | A | P | I | L | L | N | G | P | T | G | A | G | K | S | F | L | A | R | R | I | L | E | L | K | Q | A | R | H | Q | F | S | G | A | F | V | E | V | N | C | A | T | L | R | G | D | T | A | M |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
| . | . | . | . | . | . |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
V | G | G | A | E | E | A | I | E | E | L | K | E | V | V | E | F | L | K | D | P | S | K | F | N | R | I | G | A | R | M | P | K | G | I | L | L | V | G | P | P | G | T | G | K | T | L | L | A | R | A | V | A | G | E | A | . |
. |
. |
. |
. |
. |
N | V | P | F | F | H | I | S | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T |  |  |  |  | T | T | T |
|
|
|
| S |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | T |
|
|  |  |  |  |  | G | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 220 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
|
|
|
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | L | F | G | H | V | K | G | A | F | T | G | A | R | E | S | R | E | G | L | L | R | S | A | N | G | G | M | L | F | L | D | E | I | G | E | L | G | A | . |
. |
. |
. |
D | E | Q | A | M | L | L | K | A | I | E | E | K | T | F | Y | P | F | G | S | D | R | Q | V | S | S | D | F | Q | L | I | A | G | T | V | R |
Query Conservation |   |
  |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|   |
|
|
|
|   |   |
|   |   | . | . | . | . |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
Template Sequence |   |
S | D | F | V | E | L | F | V | G | V | G | A | A | R | V | R | D | L | F | A | Q | A | K | A | H | A | P | C | I | V | F | I | D | E | I | D | A | V | G | R | D | E | R | E | Q | T | L | N | Q | L | L | V | E | M | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
F | D | S | K | E | G | I | I | V | M | A | A | T | N | R |
Template Known Secondary structure |   |
G | G | T | T | T |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | T | G | G | G | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | S |
| G | G | G | T |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
  |
  |   |
333 | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | |
. |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
D | L | R | Q | L | V | A | E | G | K | F | R | E | D | L | Y | A | R | I | N | L | W | T | F | T | L | P | G | L | R | Q | R | Q | E | D | I | E | P | N | L | D | Y | E | V | E | R | H | A | S | L | T | G | D | S | V | R | F | N | T | E | A | R | R | A | W | L | A | F | A | T | S | P | Q | A | T | W | R | G | . |
N |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |
|
|
| . |
|
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|
Template Conservation |   |
  |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |
|   |   |   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
Template Sequence |   |
P | D | I | . |
. |
L | D | P | A | L | L | R | P | G | R | F | D | K | . |
. |
K | I | V | V | D | P | P | D | M | L | G | R | . |
. |
. |
. |
. |
. |
. |
. |
K | K | I | L | E | I | H | T | R | N | K | P | L | A | E | D | V | N | L | E | I | I | A | K | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | P | G | F | V |
Template Known Secondary structure |   |
G | G | G | . | . | S |
| G | G | G | G | S | T | T | S | S |
|  | . | . |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T | T | T | S |
| B |
| T | T |
|
|  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . |
| T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  | . | . |
|
|  |  |  |  |
|
|
|
|
|
|  | . | . |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
309 | 310 | . | |
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | |
|
. | . | . | . | . | 330 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
|
|
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | E | L | S | A | S | V | T | R | M | A | T | F | A | . |
. |
. |
T | S | G | R | I | T | L | D | V | V | E | D | E | I |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
G | A | D | L | E | N | L | V | N | E | A | A | L | L | A | A | R | E | G | R | D | K | I | T | M | K | D | F | E | E | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S | B |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . |
  |