Job Description P38035 Confidence 94.20% Date Thu Jan 5 11:57:48 GMT 2012 Rank 219 Aligned Residues 101 % Identity 20% Template c1ymfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp Resolution 2.60 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																					.	.	.
Query SS confidence																					.	.																																					.	.	.
Query Sequence		A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	.	.	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M	S	T	.	.	.	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L
Query Conservation																					.	.																																					.	.	.
Alig confidence																					.	.																	.	.	.																		.	.	.
Template Conservation																																							.	.	.
Template Sequence		X	L	K	K	G	X	T	T	V	L	D	F	H	P	G	A	G	K	T	R	R	F	L	P	Q	I	L	A	E	C	A	R	R	R	L	R	T	.	.	.	L	V	L	A	P	T	R	V	V	L	S	E	X	K	E	A	F	H	G	L	D	V	K	F	H	T	Q	A	F	S	A	H	G	S	G	R	E	V	I	D
Template Known Secondary structure		T	T	S	T	T									T	T	S		T	T	T	T													T				.	.	.					S	S												T	T	S						S	S								S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		279	280	.	.	.																.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	X	C	H	A	T	L	T	Y	R	X	L	E	P	T	R	V	V	N	W	E	V	I	I	X	D	E	A	H	F	L	D	P	A	S	I	A	A	R	G	W	A	A	H
Template Known Secondary structure														S	S							S					T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions