Job Description P38035 Confidence 99.05% Date Thu Jan 5 11:57:48 GMT 2012 Rank 70 Aligned Residues 207 % Identity 19% Template c1xxhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii subunit gamma; PDBTitle: atpgs bound e. coli clamp loader complex Resolution 3.45 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																			.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	E	V	N	C	A
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	.	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A
Template Known Secondary structure				S														T	T	.				S							S	T	T	S	S													S		T	T		S		S	S			S		S									T			T	T						S	S
Template Predicted Secondary structure																				.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	.	.	.	.	.	.	.	.	.	.	.	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	.	.	.	.	.	.	.	.	.	.	.	E	H	V	K	F	L	L
Template Known Secondary structure			S	T	T	T	T								T				S		S	S	S	S			.	.	.	.	.	.	.	.	.	.	.						T	G	G	G															S			.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A	F	A	T	S	P	Q	A	T	W
Query Conservation
Alig confidence						.	.	.	.	.	.	.												.	.												.	.																	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.												.	.												.	.																	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		A	T	T	D	.	.	.	.	.	.	.	P	Q	K	L	P	V	T	I	L	S	R	.	.	C	L	Q	F	H	L	K	A	L	D	V	.	.	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	H	I	.	.	.	.	.	.	A	H	E	P	R	A	L	Q	L	L	A	R	A	.	.	.	.	.	.	.	A
Template Known Secondary structure				S		.	.	.	.	.	.	.	T	T	S	S							T	.	.	S											.	.													T	T	T		.	.	.	.	.	.		B												.	.	.	.	.	.	.	S
Template Predicted Secondary structure						.	.	.	.	.	.	.												.	.												.	.																	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.								.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.								210
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	N	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		E	G	S	L	R	D	A	L	S	L	T	D	Q	A	I	A	S	G	D	G	Q	.	V	S	T	Q	A	V	S	A	M	L	G
Template Known Secondary structure			S																	T	T		.	B									S
Template Predicted Secondary structure																							.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions