Job Description P38035 Confidence 98.87% Date Thu Jan 5 11:57:48 GMT 2012 Rank 81 Aligned Residues 195 % Identity 19% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	F	L	K	S	G	I	A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	A	I	K	S	R	A	P	.	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M	S	T
Query Conservation																																	.
Alig confidence												.	.	.	.																		.																										.
Template Conservation												.	.	.	.																																												.
Template Sequence		P	Q	R	L	D	D	I	V	G	Q	.	.	.	.	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	.	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E
Template Known Secondary structure				S	G	G	G			S		.	.	.	.												T	T	T									S		T	T	S	S	T	T												G	G	.	G										T	T	T	S	S
Template Predicted Secondary structure												.	.	.	.																																												.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		K	V	K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	.	.	.	.	.	.	.	.	.	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	.	.	.	.	.	.	.	.	.	.	.	S	N	V	R	F	I	L	S	C	N	Y	.	.	.	.	.	.
Template Known Secondary structure							T	T	S			S	S	S		S			.	.	.	.	.	.	.	.	.						T	G	G	G	S															T	T	.	.	.	.	.	.	.	.	.	.	.	T	T								S		.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.												.	140	.	.	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A	F	A	T	S	P	Q	A	T	W	R	G	N	F	R	E	L	S	A	S
Query Conservation
Alig confidence		.																																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation		.																																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		.	S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	.	.	.	.	.	.	.	.	.	.	E	G	L	E	L	T	E	E	G	L	Q	A	I	L	Y	I	.	.	.	.	.	.	.	A	E	G	D	M	R	R	A	I	N	I
Template Known Secondary structure		.	G	G	G	S						T	T																									.	.	.	.	.	.	.	.	.	.		T															.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.																																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.
		419	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	R	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	A	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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