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Job DescriptionP09152
Confidence100.00%DateThu Jan 5 11:02:00 GMT 2012
Rank21Aligned Residues529
% Identity21%Templated1ogya2
SCOP infoFormate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.........100.........110.........120...
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Query Sequence  KIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWR
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Template Sequence  RWSKAPC. RFCGTGCGVMVGTRDGQVVATHGDTQAEVNRG. . . . . . . LNCVKGYFLSKIMYGEDRLTTPLLR. . . . . . . .
Template Known Secondary structure 
.SS
SS

TT
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TTTSS.......


GGGGSTT
TT


S
S........
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   13...... 20.........30.........40.........50. ........60.........70......
 
   124.....130.........140.........150.. .......160.........170.........180.........190.........200
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Query Sequence  EAKALHSDPVEAWASIIEDADKAKSFKQA. . . RGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSY
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Template Conservation  .......................... 
    

 
    






  

  
       
   
              
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . MKDGVYHKEGEFAPVSWDEAFDVMAAQAKLVLKEKAPEAVGMFGSGQWTIWEGY
Template Known Secondary structure  ..........................
SSS


TT




T
GGG
TTS
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   77..80.........90.........100.........110.........120.........130
 
   201........210.........220..... ....230.........240.........250.........260.........270.. ....
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Query Sequence  ASGARYLSLIGGTCLSFYDWYCDLP. . PASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVR. . YKGT
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Template Sequence  AASKLMRAGFRSNNLDPNARHCMASAATAFMRTFGMDEPMGCYDDFEAADAFVLWGSNMAEMHPILWSRLTDRRLSHEHV
Template Known Secondary structure  TTS



TTSS
S
SS
TT
SS

SSTT
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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
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Query Sequence  KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRML
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Template Sequence  RVAVLSTFTHRSSDLSDTPIIFRPGTDRAILNYIAHHIISTGRVNR. . . . . . DFVDRHTNFALGATDI. . . . . . . . . . . .
Template Known Secondary structure  SS

GGGGS
S

TTTTT


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SS
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   211........220.........230.........240.........250...... ...260.........270..
 
   357..360.........370.........380.........390.........400.........410.........420.........430......
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Query Sequence  RAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFG
Query Conservation 
  
            
  
  
  
    
                                                 
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   437..440.........450.........460.........470.........480.........490.........500.........510......
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Query Sequence  GDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSR
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Template Sequence  . . . . . . . . . . . GYGLRPEHQLQLAAKGAADAGAMTPTDFETFAAL. . . . . . . . . . . . . . . . . . VSEYTLEKAAEISGVEP
Template Known Secondary structure  ...........
TT

TTSS
TT
SS
S


B

..................TS



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   273......280.........290.........300...... ...310.........320...
 
   517..520.........530.........540.........550.........560.........570.........580.........590......
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Query Sequence  SQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFA
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Template Sequence  ALLEELAELYADPDR. . . . KWMSLWTMGFNQHVRGVWANHMVYNLHLLTGKISEPGNSPFSLTGQP. . . . . . . . FACGTA
Template Known Secondary structure  TTSTTS....
SSSTTT

SBTTB


ST........TTTTT
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   324.....330........ .340.........350.........360.........370.........380..... ....390.
 
   597..600.........610.........620.........630.........640.........650.........660.........670......
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Query Sequence  LDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKA
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Template Sequence  REVGTFAHRLPADMVVTNPEHRAHAEEIWKLP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
STTTTTSS
TT

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   392.......400.........410.........420...
 
   677..680.........690.........700.........710.........720.........730.........740.........750......
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Query Sequence  GMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVD
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Template Sequence  . . . . . . . AGLLPDWVGAHAVEQDRKLHDGEINFYWVQVNNNMQAAPNID. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .......TT
S

S



TS

S

STT

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   424.....430.........440.........450.........460.....
 
   757..760... ......770.........780.........790.........800.........810.........820.........830....
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Query Sequence  WQDNGLE. . GKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKF
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Template Sequence  . QETYPGYRNPENFIVVSDAYPTVTGRAADLVLPAAMWVEKEG. AYGNAERRTHFWHQLVEAPGEARSDLWQLMEFSKRF
Template Known Secondary structure  .



TT
SS

TSSB

GGGS
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TTS
B
S

STT
B
TT
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   466...470.........480.........490.........500....... ..510.........520.........530.........540...
 
   835....840.
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Query Sequence  SEVCVGH
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Template Conservation 
      
Template Sequence  TTDEVWP
Template Known Secondary structure 
S
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   544.....550
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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