|   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | N | E | L | I | A | A | S | N | V | Y | T | I | K | N | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | D | R | V | A | G | F | S | P | I | P | A | M | S | M | V | S | Y | A | S | G | A | R | Y | L | S | L | I | G | G | T | C | L | S | F | Y | D | W | Y | C | D | L | P | P | A |
Query Conservation |   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   | . |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
Template Sequence |   |
E | E | L | D | I | V | S | N | N | I | L | I | L | K | K | F | Y | T | N | D | E | W | K | N | K | L | D | S | L | I | D | R | I | I | K | A | K | K | I | F | I | F | . |
G | V | G | R | S | G | Y | I | G | R | C | F | A | M | R | L | . |
M | H | L | G | F | K | S | Y | F | V | G | E | T | T | T | P | S | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T |
|
|  |  |  | T | T | S | T | T |
|
|
| . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
  |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
S | P | Q | T | W | G | E | Q | T | D | V | P | E | S | A | D | W | Y | N | S | S | Y | I | I | A | W | G | S | N | V | P | Q | T | R | T | P | D | A | H | F | F | T | E | V | R | Y | K | G | T | K | T | V | A | V | T | P | D | Y | A | E | I | A | K | L | C | D | L | W | L | A | P | K | Q | G | T | D | . |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
| . | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|   |
|
|   |
|
|   | . | . |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|   | . | . |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | E | K | D | D | L | L | I | L | I | S | G | S | G | R | . |
. |
T | E | S | V | L | T | V | A | K | K | A | K | N | I | N | N | N | I | I | A | I | V | E | . |
. |
G | N | V | V | E | F | A | D | L | T | I | P | L | E | V | K | K | S | K | Y | L | P |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |  |
| S | S | S |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |
|
| . | . |
| G | G | G | G | G |
| S |  |  |  |
|
|
|
|
|
| B | T | T | B |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | M | A | L | A | M | G | H | V | M | L | R | E | F | H | L | D | N | P | S | Q | Y | F | T | D | Y | V | R | R | Y | T | D | M |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
M | G | T | T | F | E | E | T | A | L | I | F | L | D | L | V | I | A | E | I | M | K | R | L | N | L | D | E | . |
. |
. |
. |
. |
S | E | I | I | K | R | H | N | L | L |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
170 | . | . | . | . | . | . | . | . | . |
  |