Job Description P09152 Confidence 96.98% Date Thu Jan 5 11:02:00 GMT 2012 Rank 41 Aligned Residues 151 % Identity 9% Template c3etnD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution Resolution 1.70 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	W	Q	E	V	N	E	L	I	A	A	S	N	V	Y	T	I	K	N	Y	G	P	D	R	V	A	G	F	S	P	I	P	A	M	S	M	V	S	Y	A	S	G	A	R	Y	L	S	L	I	G	G	T	C	L	S	F	Y	D	W	Y	C	D	L	P	P	A	S	P	Q	T	W	G	E	Q	T	D	V	P	E
Query Conservation
Alig confidence																							.	.	.	.	.	.																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	E	K	A	V	E	L	I	V	E	Q	I	H	R	K	K	G	K	L	.	.	.	.	.	.	V	T	S	G	X	G	K	A	G	Q	I	A	X	N	I	A	T	T	F	C	.	S	T	G	I	P	S	V	F	L	H	P	S	E	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	D
Template Known Secondary structure		T													T	T	T	T					.	.	.	.	.	.					S																.		T	T								T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G
Template Predicted Secondary structure																							.	.	.	.	.	.																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.															.	80	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																.
Predicted Secondary structure																																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	D	W	Y	N	S	S	Y	I	I	A	W	G	S	N	V	P	Q	T	R	T	P	D	A	H	F	F	T	E	V	R	Y	K	G	T	K	T	V	A	V	.	T	P	D	Y	A	E	I	A	K	L	C	D	L	W	L	A	P	K	Q	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Query Conservation																																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	I	L	Q	E	N	D	L	L	L	L	I	S	N	S	G	K	T	R	E	I	V	E	L	T	Q	L	A	H	N	L	N	P	G	L	K	F	I	V	I	T	G	N	P	D	S	P	L	A	S	E	S	D	V	C	L	S	T	G	H	P	A	E	V	C	T	L	G	X	T	P	T	T	S	T	T	V	X	T
Template Known Secondary structure		G	G	G			T	T								S	S	S																	T	T								S		T	T	S						S	S												S	T	T	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	L	A	M	G	H	V	M	L	R	E	F	H	L	D	N	P	S	Q	Y	F	T	D	Y	V	R	R	Y	T	D	M
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		V	I	G	D	I	L	V	V	Q	T	X	K	R	T	E	F	T	I	.	.	.	.	.	E	E	Y	S	K	R	H	H	G	G
Template Known Secondary structure																T				.	.	.	.	.					T	T	S		G	G
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions