Job Description P09152 Confidence 37.28% Date Thu Jan 5 11:02:00 GMT 2012 Rank 162 Aligned Residues 47 % Identity 11% Template c2yujA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 Resolution UNK

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		1087	.	.	1090	.	.	.	.	.	.	.	.	.	1100				.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		L	N	F	L	T	P	H	Q	K	W	G	I	H	S	.	.	.	T	Y	S	D	N	L	L	M	L	T	L	G	R	G	G	P	V	V	W	L	S	E	A	D	A	K	D	L	G	I	A	D	N	D	W	I	E	V	F	N	S	N
Query Conservation																.	.	.
Alig confidence																.	.	.				.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		F	K	L	T	N	K	N	S	D	R	M	T	H	C	G	V	L	E	F	V	.	.	.	.	.	.	.	.	.	A	D	E	G	I	C	Y	L	P	H	W	M	M	Q	N	L	L	L	E	E	G	G	L	V	Q	V	E	S	V	N
Template Known Secondary structure							T	T	T	T												.	.	.	.	.	.	.	.	.		B	T	T	B					S							T			T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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