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Job DescriptionP09152
Confidence100.00%DateThu Jan 5 11:02:00 GMT 2012
Rank12Aligned Residues715
% Identity22%Templatec2e7zA_
PDB info PDB header:lyaseChain: A: PDB Molecule:acetylene hydratase ahy; PDBTitle: acetylene hydratase from pelobacter acetylenicus
Resolution1.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60..... ....70.........80.........90.........100.........110.........120....
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Query Sequence  VRSTHGVNCTGSCSWKIYVK. NGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWRE
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Template Sequence  KHVVC. QSCDINCVVEAEVKADGKIQTKSISEPHPTTPPN. . . . . . SICMKSVNADTIRTHKDRVLYPLKN. . . . . . . . .
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SSTT


TTS

SS

SSS
TT......


TT
TT


S
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   5.... 10.........20.........30.........40... ......50.........60........
 
   125....130.........140.........150. ........160.........170.........180.........190.........200...
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Query Sequence  AKALHSDPVEAWASIIEDADKAKSFKQ. ARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . VGSKRGEQRWERISWDQALDEIAEKLKKIIAKYGPESLGVSQTEINQQSEYGTL.
Template Known Secondary structure  .........................
SSSTT





GGG
GGGT


TT.
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   6970.........80.........90.........100.........110.........120..
 
   204.....210.........220..... ....230.........240.........250.........260. ........270.........280
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Query Sequence  ARYLSLIGGTCLSFYDWYCDLP. . PASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTR. TPDAHFFTEVRYKGTKTVA
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Template Sequence  RRFMNLLGSPNWTSAMYMCIGNTAGVHRVTHG. . . . SYSFASFADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIV
Template Known Secondary structure  T



GGGGTTS....S

TTT
SS


BTTBST
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   123......130.........140.........150.... .....160.........170.........180.........190........
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  VTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD
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Template Sequence  LDPRRTKVAEMADIWLPLRYGTDAALFLGMINVIINEQLYDK. . . . . . EFVENWCVG. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SS


S


TT
TT
S
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   199200.........210.........220.........230.........240 .........
 
   361........370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  LVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGT
Query Conservation              
  
  
  
    
                                                     
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   441........450.........460.........470.........480.........490.........500.........510.........520
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Query Sequence  EHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQII
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Template Conservation  ..................................
  
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FEELKER. . . . . . . . . . . . . . . . . . VQEYPLDKVAEITGCDAGEIR
Template Known Secondary structure  ....................................................TT




Template Predicted Secondary structure  ....................................................





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   250...... ...260.........270.......
 
   521........530.........540.........550.........560.........570.........580.........590.........600
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Query Sequence  RIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQ
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Template Sequence  KAAVMFATE. . . . . SPASIPWAVSTDMQKNSCSAIRAQCILRAIVGSFVNGAEILGAPHSD. . LVPISKIQMHEALPEEK
Template Known Secondary structure  S.....SS



SGGGSSTTTTTTSSS
BS
TT..S

TTGGGS
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   278.280...... ...290.........300.........310.........320.........330... ......340.........350
 
   601........610.........620.........630.........640.........650.........660.........670.........680
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Query Sequence  RPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNP
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Template Sequence  KKLQLGTETYPFLTYTGMSALEEPSERVYGVKYFHNMGAFMANPTALFTAMATEK. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TTTTT
GGGSGGGS
SS


SS
S




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   351........360.........370.........380.........390.........400.....
 
   681........690.........700.........710.........720.........730.........740.........750.........760
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Query Sequence  VDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDN
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Template Conservation  .......................   

 
     

  
 
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . PYPVKAFFALASNALMGYANQQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NAL
Template Known Secondary structure  .......................SS


S

GGGSSS
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   406...410.........420....... ..430
 
   761........770.........780.........790.........800.. .......810.........820.........830.........
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Query Sequence  GLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSD. MHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCV
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Template Sequence  KGLMNQDLVVCYDQFMTPTAQLADYVLPGDHWLERPVVQPNWEGIPFGNTSQQVVEPAGEAKDEYYFIRELAVRMGLEEH
Template Known Secondary structure  T
SSS

TTGGG
SB

GGG

B
S
SSTB
S
B


S

STT
B
TT
GGG
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   431........440.........450.........460.........470.........480.........490.........500.........510
 
   840.........850.........860.........870.........880.........890.........900.........910.........
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Query Sequence  GHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAW
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Template Conservation               ...................................................................
Template Sequence  FPWKDRLELINYR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 



S...................................................................
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   511........520...
 
   920.........930.........940.........950.........960.........970.........980.........990.........
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Query Sequence  NTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRD
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Template Conservation  ......................................................................    
     
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ISPTGMEWEE
Template Known Secondary structure  ......................................................................TGGGT

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   524.....530...
 
   1000.........1010.........1020.........1030.........1040.........1050.........1060.........1070.........
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Query Sequence  IQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKS
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Template Sequence  YQKQYTYMSKLPDYFG. . . . . . . . . . . . . . . PEGVGVATPSGKVELYSSVFEKLGY. DPLPYYHEPLQTEISDPEL. . . .
Template Known Secondary structure  TTSS





SS...............TT



SSSSSSSS
TS.
SS





SSSTTT
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   534.....540......... 550.........560.........570.... .....580.........590...
 
   1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150.........
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Query Sequence  NGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGM
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Template Sequence  . . AKEYPLILFAGLREDSNFQSCYHQPGILRDAEPDPVALLHPKTAQSLGLPSGEWIWVETTHGRLKLLLKHDGAQPEGT
Template Known Secondary structure  ..S




TT
BTTBS
STTS
S

T

TTS
SS

TTS
TT
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   594.....600.........610.........620.........630.........640.........650.........660.........670.
 
   1160.........1170......... 1180.........1190.........1200.........1210......... 1220.......
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Query Sequence  TMMYHAQERIVNLPGSEITQ. . . QRGGIHNSVTRITPKPTHMIGGYAHLAYGFNYYGTVGSNR. DEFVVVRK
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Template Sequence  IRIPHGRWCPEQEGGPETGFSGAMLHNDAMVLSDDDWNLDPEQGLP. . . . . . . . . . . . . . NLRGGILAKAYK
Template Known Secondary structure 
SS


TTS

SGGGTTTT
GGGG


SGGGB
TTT

B..............

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   672.......680.........690.........700.........710....... ..720.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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