 |
Job Description | P09152 | Confidence | 26.44% | Date | Thu Jan 5 11:02:00 GMT 2012 |
Rank | 197 | Aligned Residues | 132 |
% Identity | 9% | Template | c2decA_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:325aa long hypothetical protein; |
PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3
|
Resolution | 1.70 Å |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | N | E | L | I | A | A | S | N | V | Y | T | I | K | N | Y | G | P | D | R | V | A | G | F | S | P | I | P | A | M | S | M | V | S | Y | A | S | G | A | R | Y | L | S | L | I | G | G | T | C | L | S | F | Y | D | W | Y | C | D | L | P | P | A | S | P | Q | T | W | G | E | Q | T | D | V | P | E | S | A | D | W |
Query Conservation |   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
D | G | I | I | K | A | D | K | V | F | N | K | V | K | D | K | I | S | L | P | N | R | I | L | Y | L | G | C | G | S | S | H | F | L | S | K | L | L | A | M | V | T | N | M | H | G | G | L | G | I | A | L | P | C | S | E | F | L | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | K | E | T | Y | P | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
| S |  |  |  |  |  |  | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | G | G | G | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 310 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | N | S | S | Y | I | I | A | W | G | S | N | V | P | Q | T | R | T | P | D | A | H | F | F | T | E | V | R | Y | K | G | T | K | T | V | A | V | T | P | D | Y | A | E | I | A | K | L | C | D | L | W | L | A | P | K | Q | G | . |
. |
. |
. |
. |
. |
T | D | A | A | M | A | L | A | M | G | H | V | M | L |
Query Conservation |   |
  |
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|   |
|
|   |
|
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |
|
|   |
|
|   |
|   |
|   |
|   |
| . | . | . | . | . |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|
|   |
|
Template Sequence |   |
G | E | V | E | L | A | V | G | I | S | R | S | G | E | T | T | E | I | L | L | A | . |
. |
. |
. |
. |
L | E | K | I | N | V | K | K | L | G | I | T | T | R | E | S | S | L | T | R | M | C | D | Y | S | L | V | V | P | A | I | E | E | S | V | V | M | T | H | S | F | T | S | F | Y | F | A | Y | L | Q | L |
Template Known Secondary structure |   |
| S |
| S |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  | . | . | . | . | . |  |  | T |
|
| S |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  | S | S |  |  |  |  |
|
|
|
|
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|