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Job DescriptionP09152
Confidence100.00%DateThu Jan 5 11:02:00 GMT 2012
Rank6Aligned Residues791
% Identity23%Templatec1vlfQ_
PDB info PDB header:oxidoreductaseChain: Q: PDB Molecule:pyrogallol hydroxytransferase large subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici complexed3 with inhibitor 1,2,4,5-tetrahydroxy-benzene
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70......... 80.........90.........100.........110..
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Query Sequence  KIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYP. . . . . . . . . . . RTRPDLPNHEPRGCPRGASYSWYLYSANRLKYP
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Template Sequence  EVVRLT. . . NSSTGGPVFVYVKDGKIIRMTPMDFDDAVDAPSWKIEARGKTFTPPRKTSIAPYTAGFKSMIYSDLRIPYP
Template Known Secondary structure 

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TT

TT

B

TTTS




TT


SB



TTT
TTB

S
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   3..... .10.........20.........30.........40.........50.........60.........70.........
 
   113......120.........130.........140.........150. ........160.........170....
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Query Sequence  MMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQ. . . . . . . . . . . . . . . . . . ARGRGGFVRSSWQEVNELIAASN
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Template Conservation 


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Template Sequence  MKR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KSFDPNGERNPQLRGAGLSKQDPWSDYERISWDEATDIVVAEI
Template Known Secondary structure  ..................................TT

TTS


GGGTTTT
GGGG

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   80.. .......90.........100.........110.........120.....
 
   175....180.........190...... ...200.........210.........220...... ...230.........240 ...
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Query Sequence  VYTIKNYGPDRVAGFSPIPAMS. . . MVSYASGARYLSLIGGTCLSFYDWYCDLPP. ASPQTWGEQTDVPE. . . . . . . SAD
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Template Conservation    
    
  

    
                
     
                      
     
          
Template Sequence  NRIKHAYGPSAILSTPSSHHMWGNVGYRHSTYFRFMNMMGFTYADHNPDSWEGWHWGGMHMWGFSWRLGNPEQYDLLEDG
Template Known Secondary structure  T
GGG

S


S
TTTSTTT




GGGT

GGGTT



TT
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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   244.....250.........260.. .......270.........280.........290. ........300.........310.......
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Query Sequence  WYNSSYIIAWGSNVPQTRT. . . . . PDAHFFTEVRYKGTKTVAVTPDYAEIAKL. CDLWLAPKQGTDAAMALAMGHVMLRE
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Template Sequence  LKHAEMIVFWSSDPETNSGIYAGFESNIRRQWLKDLGVDFVFIDPHMNHTARLVADKWFSPKIGTDHALSFAIAYTWLKE
Template Known Secondary structure 
SS


SSS
TTTTTT

SB


S


TT
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   206...210.........220.........230.........240.........250.........260.........270.........280.....
 
   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  FHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGE
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Template Sequence  DSYDK. . . . . . EYVAANAHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
S
......S............................................................
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   286...290 .........
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  KGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDL
Query Conservation                                                                 
   

  
 
 




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Template Conservation  .............................................................................   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FEE
Template Known Secondary structure  .............................................................................
Template Predicted Secondary structure  .............................................................................
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   300..
 
   478.480.........490.........500.........510.........520.........530.........540... ......550...
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Query Sequence  TLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGA. . . . GLNHWYHLDM
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Template Sequence  WAD. . . . . . . . . . . . YVLGKTDGTPKTCEWAEEESGVPACEIRALARQWAKK. . . . . NTYLAAGGLGGWGGACRASHGIE
Template Known Secondary structure  ............TTTTTS




S
S.....
TTTTS

GGGSBTT
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   303.. ....310.........320.........330.........340.. .......350.........360.....
 
   554.....560.........570.........580.........590.........600.........610.........620.........630...
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Query Sequence  NYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPM
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Template Sequence  WARGMIALATMQG. MGKPGSNMWSTTQGVPLDYEFYFPGYAEGGISGDCENSAAGFKFAWRMFD. . . . . . . . . . . . . . . .
Template Known Secondary structure  TT.TTSTT


SSS




TTS



GGG
TTS

TTTSSGGGT

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   366...370........ .380.........390.........400.........410.........420........
 
   634.....640.........650.........660.........670.........680.........690.........700.........710...
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Query Sequence  ADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIW
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Template Conservation  ............                                                             

 
   
Template Sequence  . . . . . . . . . . . . GKTTFPSPSNLNTSAGQHIPRLKIPECIMGGKFQWSGKGFAGGDISHQLHQYEYPAPGYSKIKMFWKY
Template Known Secondary structure  ............SSS





SSSSTTS
GGGS


SS

SSGGGGG
S
TT




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   429430.........440.........450.........460.........470.........480.........490......
 
   714.....720.........730.........740.........750.........760... ......770.........780.........790.
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Query Sequence  RSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLE. . GKLDLVVTLDFRLSSTCLYSDIILPTAT
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Template Sequence  GGPHLGTMTATN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RYAKMYTHDSLEFVVSQSIWFEGEVPFADIILPACT
Template Known Secondary structure  S

SSST................................TT
TT

SBS
TTGGG
SB

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   497..500........ .510.........520.........530.........540....
 
   792...... .800.........810.........820.........830.........840.........850........
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Query Sequence  WYEKDDM. . . . . . . . . . . . . NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSA
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Template Conservation    
                                
 
 



 
 

   

 


                       
Template Sequence  NFERWDISEFANCSGYIPDNYQLCNHRVISLQAKCIEPVGESMSDYEIYRLFAKKLNIEEMFSEGKDELAWCEQYFNATD
Template Known Secondary structure  GGGS
TT

BTTBTTGGGGSSS



S

STT
B
TT
TT

TSS
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   545....550.........560.........570.........580.........590.........600.........610.........620....
 
   859860.........870.........880.........890.........900.........910.........920.........930........
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Query Sequence  AELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEG
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Template Conservation         
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Template Sequence  MPKYMTWDEFF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGT

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   625....630.....
 
   939940.........950.........960.........970.........980.........990.........1000.........1010........
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Query Sequence  PAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLED
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Template Conservation  ....................................................  
                         
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KKGYFVVPDNPNRKKTVALRWFAEGREK
Template Known Secondary structure  ....................................................




TTS



TTTTSB
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   636...640.........650.........660...
 
   10191020.........1030.........1040.........1050.........1060.........1070.........1080.........1090........
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Query Sequence  EHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGI
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Template Conservation                     
 


 
 
   
                
                 


 
 
       
Template Sequence  DTPDWGPRLNNQVCRKGLQTTTGKVEFIATSLKNFEEQGYIDEHRPSMHTYVPAWESQKHSPLAVKYPLGMLSPHPRFSM
Template Known Secondary structure 
SS


S
GGGSBTTBS
SSTTSSSB
TT


TTS
SB





TTSTTT
GGGGT





TTSB
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   664.....670.........680.........690.........700.........710.........720.........730.........740...
 
   10991100.........1110...... ...1120.........1130.........1140.........1150.........1160........
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Query Sequence  HSTYSDNLLMLTLGRGGP. . . . . . . . . . VVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQER
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Template Conservation 

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Template Sequence  HTMG. DGKNSYMNYIKDHRVEVDGYKYWIMRVNSIDAEARGIKNGDLIRAYNDRGSVILAAQVTECLQPGTVHSYESCAV
Template Known Secondary structure  TTBS.SSTT
GGGGSTTTTTTT

TT
TTSSB
TT

S



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   744... ..750.........760.........770.........780.........790.........800.........810.........820..
 
   11691170.........1180.........1190.........1200.........1210.........1220.........
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Query Sequence  IVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMK
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Template Conservation               
   
 

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Template Sequence  YDPLGTAGKSADRGGCINILTPDR. YISKYACGM. . . . . . . . . . . . . . ANNTALVEIEKWD
Template Known Secondary structure 

BSSSTTTS
BSS

GGGSS

S.
SSSS



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BT


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   823......830.........840...... ...850..... ....860........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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