Job Description P06149 Confidence 30.31% Date Thu Jan 5 10:59:07 GMT 2012 Rank 92 Aligned Residues 110 % Identity 21% Template c2yv2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 aeropyrum pernix k1 Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		L	L	T	D	P	A	K	T	A	R	Y	R	K	G	F	R	S	G	Q	G	D	A	L	A	V	V	F	P	G	.	.	S	L	L	E	L	W	R	V	L	K	A	C	V	T	A	D	K	I	I	L	M	Q	A	A	N	T	G	L	T	E	G	S	T	P	N	G	N	D	Y	D	R	D	V	V	I	I	S	T	L
Query Conservation																															.	.
Alig confidence																															.	.																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	F	V	P	A	P	F	A	P	D	A	V	Y	E	A	V	D	A	G	I	R	L	V	V	V	I	T	E	G	I	P	V	H	D	T	M	R	F	V	N	Y	A	R	Q	K	G	A	T	I	I	.	.	.	.	G	P	N	C	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	T	P	G	Q
Template Known Secondary structure							G	G	G											T	T		S																									T					.	.	.	.		S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.														.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		R	L	D	K	L	H	V	L	G	K	G	E	.	.	.	.	Q	V	L	A	Y	P	G	T	T	L	Y	S	L	E	K	A	L	K	P	L	G	R	E	P	H	S	V	I	G	S	S	C	I	G	A	S	V	I
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																													.
Template Conservation																																														.
Template Sequence		A	K	V	G	I	M	P	G	H	I	F	K	E	G	G	V	A	V	V	S	R	S	G	T	L	T	Y	E	I	S	Y	M	L	T	R	Q	G	I	G	Q	S	T	V	I	.	G	I	G	G	D	P	I	V	G
Template Known Secondary structure						S			G	G	G											S															T	T								.				S	S	S	S		S
Template Predicted Secondary structure																																														.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions