Job Description P06149 Confidence 42.22% Date Thu Jan 5 10:59:07 GMT 2012 Rank 77 Aligned Residues 110 % Identity 15% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		L	L	T	D	P	A	K	T	A	R	Y	R	K	G	F	R	S	G	Q	G	D	A	L	A	V	V	F	P	.	.	G	S	L	L	E	L	W	R	V	L	K	A	C	V	T	A	D	K	I	I	L	M	Q	A	A	N	T	G	L	T	E	G	S	T	P	N	G	N	D	Y	D	R	D	V	V	I	I	S	T	L
Query Conservation																														.	.
Alig confidence																														.	.																						.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	F	V	P	A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	.	.	.	.	G	P	N	T	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	P	K	V
Template Known Secondary structure																				T	T		S							S																		T					.	.	.	.		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																																																					.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.														.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure											.	.	.								.
Query SS confidence											.	.	.								.
Query Sequence		R	L	D	K	L	H	V	L	G	.	.	.	K	G	E	Q	V	L	A	.	Y	P	G	T	T	L	Y	S	L	E	K	A	L	K	P	L	G	R	E	P	H	S	V	I	G	S	S	C	I	G	A	S	V	I
Query Conservation											.	.	.								.
Alig confidence											.	.	.								.																									.
Template Conservation																																														.
Template Sequence		G	K	L	G	I	I	P	M	E	V	L	K	E	G	S	V	G	M	V	S	R	S	G	T	L	T	Y	E	I	A	H	Q	I	K	K	A	G	F	G	V	S	T	C	V	.	G	I	G	G	D	P	I	V	G
Template Known Secondary structure									G	G	G											S		S													T	T								.				S	S	S	S		S
Template Predicted Secondary structure																																														.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions