Return to main results Retrieve Phyre Job Id

Job DescriptionP77737
Confidence98.03%DateThu Jan 5 12:32:21 GMT 2012
Rank102Aligned Residues186
% Identity13%Templatec3bh0A_
PDB info PDB header:replicationChain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  PKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLAS
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Template Sequence  PSGFTELDRMTYGYKRRNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEM. . . . . . . . . . . . . . . . . . . . GKKEN
Template Known Secondary structure 

S
SSB
TT


TTSSTTT
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   179180.........190.........200.........210.........220.........230... .....
 
   114.....120.........130.........140.........150.........160.........170.........180. ........190
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Query Sequence  LNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALIL. EPKLIICDE. .
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Template Sequence  IKRLIVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMIDYLQ
Template Known Secondary structure  TT

S

SS
TS


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BTSSS


GG
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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   191........200.........210.........220...... ...230.........
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Query Sequence  . . . . . PVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA. . . . . . . . . . . . . . . . . . . VVKHISDRVLVMY
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Template Sequence  LLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRESGQLEQDADIIEFLY
Template Known Secondary structure  GSB
S
TTS
T



GGGTTSSS



GGGGTTTS
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   319320.........330.........340.........350.........360.........370.........380.........390.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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