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Job DescriptionP77737
Confidence94.96%DateThu Jan 5 12:32:21 GMT 2012
Rank465Aligned Residues131
% Identity15%Templatec2r2aB_
PDB info PDB header:toxinChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of n-terminal domain of zonular occludens toxin from2 neisseria meningitidis
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70..... ....80.........90..... ....100.........110.........120...
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Query Sequence  ETLGVVGESGCGKSTFARAIIGLVK. . . . . . ATDGHVAWLGKELLGMKPDE. WRAVRSDIQMIFQDPLASLNPRMTIGEI
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Template Sequence  EICLITGTPGSGKTLKXVSXXANDEXFKPDENGIRRKVFTNIKGLKIPHTYIETDAKKLPKSTDEQLSAHDXYEWIKKPE
Template Known Secondary structure 


TTSS
GGGS

TTS





SSB
S


B

TTT
SS

SSS
BGGGTTSGG
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   124.....130.........140.........150.........160.........170.........180.........190...... ...
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Query Sequence  IAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALD. . . . VSI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NIGSIVIVDEAQDVWPARSAGSK
Template Known Secondary structure  .........................................................GTT
TTGGGTSB


TT

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   83......90.........100.....
 
   200.........210.........220...... ...230.........
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Query Sequence  QAQVVNLLQQLQREMGLSLIFIAHDLA. . . . VVKHISDRVLVMY
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Template Sequence  IPENVQWLNT. HRHQGIDIFVLTQGPKLLDQNLRTLVRKHYHIA
Template Known Secondary structure 

GGGG.GGGTT
S
GGGB
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   106...110..... ....120.........130.........140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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