Job Description P77737 Confidence 100.00% Date Thu Jan 5 12:32:21 GMT 2012 Rank 28 Aligned Residues 219 % Identity 30% Template c2pcjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5 Resolution 1.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	E	I	A	D	L	K	V	H	F	E	I	K	D	G	K	Q	W	F	W	Q	P	P	K	T	L	K	A	V	D	G	V	T	L	R	L	Y	E	G	E	T	L	G	V	V	G	E	S	G	C	G	K	S	T	F	A	R	A	I	I	G	L	V	K	A	T	D	G	H	V	A	W	L	G	K	E	L	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	L	R	A	E	N	I	K	K	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	Y	E	I	L	K	G	I	S	L	S	V	K	K	G	E	F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	E	G	K	V	F	L	E	G	K	E	V	D
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													T	T									T	T	S										T	T	S	S			S							T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.														.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	M	K	P	D	E	W	R	A	V	.	R	S	D	I	Q	M	I	F	Q	D	P	L	A	S	L	N	P	R	M	T	I	G	E	I	I	A	E	P	L	R	T	Y	H	P	K	M	S	R	Q	E	V	R	E	R	V	K	A	M	M	L	K	V	G	L	L	P	N	L	I	N	R	Y	P	H	E	F	S	G	G
Query Conservation												.
Alig confidence												.													.	.																				.	.																					.
Template Conservation																									.	.																				.	.																					.
Template Sequence		Y	T	N	E	K	E	L	S	L	L	R	N	R	K	L	G	F	V	F	Q	F	H	Y	.	.	L	I	P	E	L	T	A	L	E	N	V	I	V	P	M	L	K	M	G	.	.	K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	G	.	D	K	L	S	R	K	P	Y	E	L	S	G	G
Template Known Secondary structure		T	T																		S	S			.	.			T	T	S													T	T	.	.																	T	T		T	.	T		T	T			G	G	G	S
Template Predicted Secondary structure																									.	.																				.	.																					.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	Q	R	I	G	I	A	R	A	L	I	L	E	P	K	L	I	I	C	D	E	P	V	S	A	L	D	V	S	I	Q	A	Q	V	V	N	L	L	Q	Q	L	Q	R	E	M	G	L	S	L	I	F	I	A	H	D	L	A	V	V	K	H	I	S	D	R	V	L	V	M	Y	L	G	H	A	V	E	L	G	T
Query Conservation
Alig confidence																																															.															.
Template Conservation																																															.															.
Template Sequence		E	Q	Q	R	V	A	I	A	R	A	L	A	N	E	P	I	L	L	F	A	D	E	P	T	G	N	L	D	S	A	N	T	K	R	V	M	D	I	F	L	K	I	N	E	G	.	G	T	S	I	V	M	V	T	H	E	R	E	L	A	.	E	L	T	H	R	T	L	E	M	K	D	G	K	V	V	G	E	I	T
Template Known Secondary structure													T	T			S						S	T	T	T	T	S																		T	.	T								S						.	T	T	S	S							T	T
Template Predicted Secondary structure																																															.															.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions