Job Description P77737 Confidence 100.00% Date Thu Jan 5 12:32:21 GMT 2012 Rank 52 Aligned Residues 215 % Identity 25% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	A	D	L	K	V	H	F	E	I	K	D	G	K	Q	W	F	W	Q	P	P	K	T	L	K	A	V	D	G	V	T	L	R	L	Y	E	G	E	T	L	G	V	V	G	E	S	G	C	G	K	S	T	F	A	R	A	I	I	G	L	V	K	A	T	D	G	H	V	A	W	L	G	K	E	L	L	G	M
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.																.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	P	D	E	W	R	A	V	R	S	D	I	Q	M	I	F	Q	D	P	L	A	S	L	N	P	R	M	T	I	G	E	I	I	A	E	P	L	R	T	Y	H	P	K	M	S	R	Q	E	V	R	E	R	V	K	A	M	M	L	K	V	G	L	L	P	N	L	I	N	R	Y	.	P	H	E	F	S	G	G	Q	C
Query Conservation																																																																								.
Alig confidence					.	.	.														.	.	.															.	.	.	.	.																														.
Template Conservation					.	.	.														.	.	.															.	.	.	.	.
Template Sequence		N	R	N	.	.	.	S	I	R	S	I	I	G	I	V	P	Q	D	T	.	.	.	I	L	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R
Template Known Secondary structure					.	.	.				T	T						S	S		.	.	.				S	S	B							T	T	.	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure					.	.	.														.	.	.															.	.	.	.	.
Template SS confidence
		87	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	G	I	A	R	A	L	I	L	E	P	K	L	I	I	C	D	E	P	V	S	A	L	D	V	S	I	Q	A	Q	V	V	N	L	L	Q	Q	L	Q	R	E	M	G	L	S	L	I	F	I	A	H	D	L	A	V	V	K	H	I	S	D	R	V	L	V	M	Y	L	G	H	A	V	E	L	G	T	Y	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.									.															.
Template Conservation																											.	.	.	.	.	.	.	.	.	.									.															.
Template Sequence		Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K
Template Known Secondary structure												T			S												.	.	.	.	.	.	.	.	.	.									.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.									.															.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Y	H	N	P	L	H	P	Y	T	R	A	L	M	S	A
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		D	L	L	K	.	.	L	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure						.	.		T	S								T
Template Predicted Secondary structure						.	.
Template SS confidence
		239	240	.	.			.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions