Job Description P77737 Confidence 97.69% Date Thu Jan 5 12:32:21 GMT 2012 Rank 115 Aligned Residues 130 % Identity 18% Template c2cvhB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase Resolution 2.20 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	G	E	T	L	G	V	V	G	E	S	G	C	G	K	S	T	F	A	R	A	I	I	G	L	V	K	A	T	D	G	H	V	A	W	L	G	K	E	L	L	G	M	K	P	D	E	W	R	A	V	R	S	D	I	Q	M	I	F	Q	D	P	L	A	S	L	N	P	R	M	T	I	G	E	I	I	A	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	L	L	S	G	K	K	V	A	Y	V	D	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B		T	T	S							S	T	T	S	S														S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.									.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.
Query Sequence		P	L	R	T	Y	H	P	K	M	S	R	Q	E	V	R	E	R	V	K	A	M	M	L	K	V	G	L	L	P	N	L	I	N	R	Y	P	H	E	F	S	G	G	Q	C	Q	R	I	G	I	A	R	A	L	I	L	E	P	K	L	I	I	C	D	E	P	V	S	A	L	.	.	.	.	.	.	.	.	D	V	S
Query Conservation																																																																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	G	F	S	P	E	R	L	V	Q	M	A	E	T	R	G	L	N	P	E	E	A	L	S	R	F	I	L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	S	N	F	A	L	V	V	V	D	S	I	T	A	H	Y	R	A	E	E	N	R	S	G	L	I	A
Template Known Secondary structure		.	.	.	.	.	S														T	T																	S	S																T	T										S		S	B	T	T	B
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	Q	V	V	N	L	L	Q	Q	L	Q	R	E	M	G	L	S	L	I	F	I	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	S	R	Q	L	Q	V	L	L	W	I	A	R	K	H	N	I	P	V	I	V	I	N	Q
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions