Return to main results Retrieve Phyre Job Id

Job DescriptionP77737
Confidence100.00%DateThu Jan 5 12:32:21 GMT 2012
Rank41Aligned Residues223
% Identity23%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  LEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGM
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Template Sequence  ITVRNATFTWARSDP. . . . . . . . . . . PTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG. . . . . .
Template Known Secondary structure  S
TTS
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S
TT

STTSSTT
S
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   644.....650........ .660.........670.........680.........690.........700......
 
   92.......100.........110.........120.........130.........140.........150....... ..160.........170
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Query Sequence  KPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNL. INRYPHEFSGGQC
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Template Sequence  . . . . . . . . . . SVAYVPQQA. . . WIQNDSLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQK
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SS
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TTTT
TTSTTGGGSSTTSB


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   707..710..... ....720.........730.........740.........750.........760.........770...
 
   171........180.........190.........200.........210. ........220.........230.........240.........
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Query Sequence  QRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQ. REMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTY
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Template Sequence  QRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQ. VDVIIVMSGGKISEMGSY
Template Known Secondary structure 

SSTTTTS
TTSTTSTTTTS
S
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   774.....780.........790.........800.........810.........820.........830.... .....840.........850..
 
   250.........260.......
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Query Sequence  DEVYHNPLHPYTRALMSA
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Template Sequence  QELLAR. . DGAFAEFLRT
Template Known Secondary structure  ..TS
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   853..... .860........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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