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Job DescriptionP77737
Confidence100.00%DateThu Jan 5 12:32:21 GMT 2012
Rank44Aligned Residues201
% Identity24%Templatec1yqtA_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  GRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGK
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Template Sequence  ERETLVTYPRLVKDYGS. . . . . . . . . . . . . . FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKXLAGVEEPTEGKIEWDLT
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TT..............

TT


TTSSTSS

SB







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   335....340.........350. ........360.........370.........380.........390.........400
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  ELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFS
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Template Sequence  . . . . . . . . . . . . . . . . . . VAYKPQYIKADYEGTVYELLSKID. . . . . . ASKLNSNFYKTELLKPLGII. DLYDREVNELS
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SS




SSB......T
TTTTTT
G.GGTTSBGGG

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   401........410.........420.... .....430.........440.... .....450.....
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  GGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVEL
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Template Sequence  GGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLXEKNEKTALVVEHDVLXIDYVSDRLXVF. EGEPGKY
Template Known Secondary structure  TS

S
TTTT

T

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   456...460.........470.........480.........490.........500.........510.........520....... ..530....
 
   247
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Query Sequence  G
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  G
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   535
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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