Job Description P77737 Confidence 100.00% Date Thu Jan 5 12:32:21 GMT 2012 Rank 13 Aligned Residues 231 % Identity 33% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	T	E	G	R	K	V	L	L	E	I	A	D	L	K	V	H	F	E	I	K	D	G	K	Q	W	F	W	Q	P	P	K	T	L	K	A	V	D	G	V	T	L	R	L	Y	E	G	E	T	L	G	V	V	G	E	S	G	C	G	K	S	T	F	A	R	A	I	I	G	L	V	K	A	T	D	G	H	V	A
Query Conservation
Alig confidence						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	V	E	.	.	.	.	.	V	K	L	E	N	L	T	K	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	F	T	A	V	N	K	L	N	L	T	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	M	I	A	G	L	E	E	P	T	E	G	R	I	Y
Template Known Secondary structure						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													T	T									T	T	S	S										T	S	S			S
Template Predicted Secondary structure						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.						.	.	.	.	.	.	.	20	.	.														.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	G	K	E	L	L	G	M	K	P	D	E	W	R	A	V	R	S	D	I	Q	M	I	F	Q	D	P	L	A	S	L	N	P	R	M	T	I	G	E	I	I	A	E	P	L	R	T	Y	H	P	K	M	S	R	Q	E	V	R	E	R	V	K	A	M	M	L	K	V	G	L	L	P	N	L	I	N	R	Y	P
Query Conservation
Alig confidence															.	.	.	.	.										.	.	.	.	.	.	.	.														.	.	.	.																					.
Template Conservation															.	.	.	.	.										.	.	.	.	.	.	.	.														.	.	.	.																					.
Template Sequence		F	G	D	R	D	V	T	Y	L	P	P	K	D	.	.	.	.	.	R	N	I	S	M	V	F	Q	H	.	.	.	.	.	.	.	.	M	T	V	Y	E	N	I	A	F	P	L	K	K	.	.	.	.	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	E	.	E	L	L	N	R	Y	P
Template Known Secondary structure			T	T				T	T	S		G	G	G	.	.	.	.	.	T	T								.	.	.	.	.	.	.	.									T	T				.	.	.	.																	T	T		G	.	G	G	T	T			G
Template Predicted Secondary structure															.	.	.	.	.										.	.	.	.	.	.	.	.														.	.	.	.																					.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	F	S	G	G	Q	C	Q	R	I	G	I	A	R	A	L	I	L	E	P	K	L	I	I	C	D	E	P	V	S	A	L	D	V	S	I	Q	A	Q	V	V	N	L	L	Q	Q	L	Q	R	E	M	G	L	S	L	I	F	I	A	H	D	L	A	V	V	K	H	I	S	D	R	V	L	V	M	Y	L	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	L	S	G	G	Q	R	Q	R	V	A	V	A	R	A	I	V	V	E	P	D	V	L	L	M	D	E	P	L	S	N	L	D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K	L	K	V	T	T	I	Y	V	T	H	D	Q	V	E	A	M	T	M	G	D	R	I	A	V	M	N	R	G	Q
Template Known Secondary structure		G	G			S	S												T	T			S						S	T	T	T	T	S																												S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	L	G	T	Y	D	E	V	Y	H	N	P	L	H	P	Y	T	R	A	L	M	S	A	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Q	I	G	S	P	T	E	V	Y	L	R	P	N	S	V	F	V	A	T	F	I	G	A	P	E
Template Known Secondary structure														S		S	B							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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