Return to main results Retrieve Phyre Job Id

Job DescriptionP76016
Confidence99.52%DateThu Jan 5 12:17:28 GMT 2012
Rank36Aligned Residues219
% Identity15%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   320.........330.........340.........350.........360.........370... ......380.........390..
Predicted Secondary structure 






















....









...
Query SS confidence 





















































. . . .


















. . .
Query Sequence  VSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESE. . . . RAAGPYIAVNCELYGDAAL. . .
Query Conservation           
 
             
    



 

 



   
 


  
 ....    


 
 
        ...
Alig confidence 























..



























....


















...
Template Conservation   
    



 
     
   
  ..     


 

 
 


 

  

                              
Template Sequence  RPKNLDEVTAQDHAVTVLKKTLKS. . ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREK
Template Known Secondary structure 

SSTTT

S

TTTT
..TT



STTSSTTS
SSS


TT
Template Predicted Secondary structure 







..























Template SS confidence 















































































   32.......40.........50..... ....60.........70.........80.........90.........100.........
 
   393......400.........410.........420.........430.........440.........450.........460.........470..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  AEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLV
Query Conservation     
 
           
    
  


 



  
    
  
   
                  


      
    
Alig confidence 

















































...........











.......
Template Conservation                            
   
                   ...........       
    .......
Template Sequence  VKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET. . . . . . . . . . . YSGVTRFCLICN. . . . . . .
Template Known Secondary structure  S





TTS


S
TTGGGS
...........TTTTS.......
Template Predicted Secondary structure 





...........





.......
Template SS confidence 















































































   110.........120.........130.........140.........150......... 160.........170.
 
   473......480.........490.........500.........510.........520.........530.........540.........550..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  EQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLAL
Query Conservation          
   
    
 






  

  
    
             
  
   
  
 







   
     
Alig confidence 
























........









..
















.
















Template Conservation             
             ........    
     ..          
  
   .  

 
  
  
  
  
Template Sequence  YVTRIIDPLASQCSKFRFKALDASN. . . . . . . . AIDRLRFISE. . QENVKCDDGVLERILDI. SAGDLRRGITLLQSASK
Template Known Secondary structure 
GGGS
S




..........TTT



.TSS
T
Template Predicted Secondary structure 










..........






.



Template SS confidence 















































































   172.......180.........190...... ...200...... ...210.........220... ......230.........240
 
   553. .....560.........
Predicted Secondary structure 
....





Query SS confidence 

. . . .














Query Sequence  SS. . . . DNGRIRVSDLPEHLF
Query Conservation    ....    
    

    
Alig confidence 

....














Template Conservation   
        

   
 
  
Template Sequence  GAQYLGDGKNITSTQVEELAG
Template Known Secondary structure 
S




T
Template Predicted Secondary structure 







Template SS confidence 




















   241........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions