Return to main results Retrieve Phyre Job Id

Job DescriptionP76016
Confidence99.88%DateThu Jan 5 12:17:28 GMT 2012
Rank8Aligned Residues227
% Identity17%Templated1r6bx3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AHMPQDDPQTRRLIHFGRQAA. . . . . . . RSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFI
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Template Sequence  MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL. . . GIELLRFDMSEYMERHTVSRLI
Template Known Secondary structure  TTS
S
TT
S
TTS
S
STTSS...T
GGG
SSSS

SSS
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   458.460.........470.........480.........490.........500.........510.. .......520.........530....
 
   398.400.........410.. .......420.........430.........440.........450.........460..... ....470..
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Query Sequence  GGDRTDNENGRLSRL. . . . ELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTT. ADLAMLV
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Template Sequence  GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRAMEE
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S
STT
SSTGGGS
STTT
TT
SS


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   535....540.........550.........560.........570.........580.........590.........600.........610....
 
   473......480.........490.........500.........510.........520.........530... ......540.........550
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Query Sequence  EQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVS. . CAWPGNDFELYSVIENL
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Template Sequence  IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN
Template Known Secondary structure  S
TT
S




TT

BTTTBTTT
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   632.......640.........650.........660.........670.........680.........690.........700.........710.
 
   551...
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Query Sequence  ALSS
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Template Conservation 
   
Template Sequence  LKKP
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   712...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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