Return to main results Retrieve Phyre Job Id

Job DescriptionP76016
Confidence99.73%DateThu Jan 5 12:17:28 GMT 2012
Rank20Aligned Residues243
% Identity14%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   319320.........330.........340.........350.........360.........370.... .....380.......
Predicted Secondary structure 
























....







.......
Query SS confidence 























































. . . .












. . . . . . .
Query Sequence  KVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESER. . . . AAGPYIAVNCELY. . . . . . .
Query Conservation            
 
             
    



 

 



   
 


  
  ....   


 
 
   .......
Alig confidence 






















..






























....












.......
Template Conservation       
  




  
  
  
 ..       


 







 


 

  
                          
Template Sequence  RPVFPFSAIVGQEDMKLALLLTA. . VDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVL
Template Known Secondary structure 




GGGS
S
..
GGG



GGG
TTS

TT
TT

SSGGGS
TT


S
Template Predicted Secondary structure 






..






















Template SS confidence 















































































   18.20.........30.........40 .........50.........60.........70.........80.........90.....
 
   388.390.........400 .........410.........420.........430.........440.......
Predicted Secondary structure  ..............




......



















Query SS confidence  . . . . . . . . . . . . . .












. . . . . .














































Query Sequence  . . . . . . . . . . . . . . GDAALAEEFIGGD. . . . . . RTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITR
Query Conservation  ..............        
 
  ......         
    
  


 



  
    
  
   
       
Alig confidence  ..............












......














































Template Conservation                        
                   
    
   
   

           

  
 
     
Template Sequence  STNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVV
Template Known Secondary structure 






TT




GGG

TTTTGGGS
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   448.450.........460.........470.........480..... ....490.........500.........510
Predicted Secondary structure  ..
















.










..............
Query SS confidence  . .





































.
























. . . . . . . . . . . . . .
Query Sequence  . . LDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYAL. HAFEITIPPLRMRRGSIPALVNNKL. . . . . . . . . . . . . .
Query Conservation  ..           


      
            
   
.    
 






  

  
    
..............
Alig confidence  ..


















......












.
























..............
Template Conservation                 

    ......        
  
    
 
  
        
                      
Template Sequence  ERDGLSIRHPARFVLVGSGNP. . . . . . EEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKD
Template Known Secondary structure 

TT




S......
S



TT
S




S
Template Predicted Secondary structure 









......















Template SS confidence 















































































   176...180.........190...... ...200.........210.........220.........230.........240.........
 
   511........520.........530......... 540.........550.... .....560.........
Predicted Secondary structure  ......













...
...





Query SS confidence  . . . . . .




























. . .














. . .














Query Sequence  . . . . . . RSLEKRFSTRLKIDDDALARLVSCAWPGN. . . DFELYSVIENLALSS. . . DNGRIRVSDLPEHLF
Query Conservation  ......             
  
   
  
 



...



   
       ...    
    

    
Alig confidence  ......




























...














...














Template Conservation           
                
          
 
    

  
   
   
   
   

  
  
Template Sequence  MDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVAT
Template Known Secondary structure  GGG
B

SSS
STT
SB

Template Predicted Secondary structure 

















Template SS confidence 






































































   250.........260.........270.........280.........290.........300.........310.........320
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions