Return to main results Retrieve Phyre Job Id

Job DescriptionP76016
Confidence99.44%DateThu Jan 5 12:17:28 GMT 2012
Rank43Aligned Residues192
% Identity18%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   325....330.........340.... .....350.........360.........370.........380.........390......
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Query Sequence  AHMPQDDPQTRRLIHFGRQA. . . . . . . . ARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEF
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Template Sequence  NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES. . . NFPFIKICSPDKMIGFSETAK
Template Known Secondary structure  T




S
SS
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STTSS...T
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GGG
TT

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   513......520.........530.........540.........550.........560........ .570.........580.........
 
   397..400.........410..... ....420........ .430.........440.........450.........460...
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Query Sequence  IGGDRTDNENGRLSRLELA. . . HGGTLFLEKIEYL. . . . . . . . . . AVELQSALLQVIKQGVITRLDARRLIPIDVKVIAT
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Template Sequence  CQAM. . . . . . . . KKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLK. . . . . . . . KAPPQGRKLLIIGT
Template Known Secondary structure  ........TSS

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BTTTTB

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   590... ......600.........610.........620.........630......... 640.........650...
 
   464.....470.........480.........490.........500.........510.........520.........530.........540...
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Query Sequence  TTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFEL
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Template Sequence  TSR. . KDVLQEMEMLNAFSTT. . . . . IHVPNIATGEQ. . . . . . . . LLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKL
Template Known Secondary structure  S
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   654.. ...660.........670.. .......680... ......690.........700.........710........
 
   544.....550
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Query Sequence  YSVIENL
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Template Sequence  LMLIEMS
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   719720.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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