Job Description P76016 Confidence 98.00% Date Thu Jan 5 12:17:28 GMT 2012 Rank 121 Aligned Residues 184 % Identity 19% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		G	R	Q	A	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	.	Y	G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	H	G	G	T
Query Conservation																																																.
Alig confidence																																				.	.	.										.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	D	S	L	H	Q	K	Y	G	G	C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	F	G	Q	N	L	G	R	.	.	.	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	V	G	I	T	Q	I	G	A	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T	T							T	T	S	S									T	S	S				.	.	.								S	S	S	S		S												T	T					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1782	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.				.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.										.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		L	F	L	E	K	I	E	Y	L	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	.	.	.	.	.	.	.	.	.	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence		.																							.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	C	F	D	E	F	N	R	L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	N	L	K	K	S	F	R	E	F	S	M
Template Known Secondary structure		.				T	T	T	T	S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.	.	.	.	.	.	.	.	.							T	T	T
Template Predicted Secondary structure		.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			1846	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.													.	1900	.	.	.	.	.	.	.	.	.	1910	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.			510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	.	.	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L	V	S	C	A	W	P	G	N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	D	N	G
Query Conservation																					.	.
Alig confidence		.					.														.	.																												.	.
Template Conservation		.					.																																											.	.
Template Sequence		.	K	S	Q	S	.	G	T	I	A	E	M	I	L	Q	I	M	G	F	E	D	S	K	S	L	A	S	K	I	V	H	F	L	E	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	.	.	G	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F
Template Known Secondary structure		.					.													T	S	S																					S	S	S					.	.																			S
Template Predicted Secondary structure		.					.																																											.	.
Template SS confidence
			1922	.	.	.		.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.			.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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