Job Description P76016 Confidence 96.70% Date Thu Jan 5 12:17:28 GMT 2012 Rank 189 Aligned Residues 129 % Identity 10% Template c3o5yA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a Resolution 2.45 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	L	G	Q	A	A	L	E	D	A	W	E	Y	M	A	P	R	E	C	A	L	F	I	L	D	E	T	A	C	I	L	S	R	N	G	D	P	Q	T	L	Q	Q	L	S	A	L	G	F	N	D	G	T	Y	C	A	E	G	I	I	G	T	C	A	L	S	L	A	A	I	S	G	Q	A	V	K	T	M	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																				.	.	.	.	.	.																	.	.	.																			.	.	.
Template Conservation																																				.	.	.	.	.	.																	.	.	.
Template Sequence		D	I	I	N	N	X	I	D	K	L	K	L	L	V	H	F	D	R	I	S	F	L	L	L	A	N	E	T	L	K	L	S	H	V	.	.	.	.	.	.	Y	P	K	G	S	H	S	L	D	I	G	S	T	I	P	K	.	.	.	E	Q	S	L	Y	W	S	A	L	D	Q	R	Q	T	I	F	R	S	L	T	D
Template Known Secondary structure															S			S									T	T								.	.	.	.	.	.		S	T	T			S	S		T	T					S	.	.	.	T	T										T	S						S
Template Predicted Secondary structure																																				.	.	.	.	.	.																	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
							132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.																																						.
Query SS confidence		.	.	.	.	.																																						.
Query Sequence		.	.	.	.	.	A	D	Q	H	F	K	Q	V	L	W	N	W	A	F	C	A	T	P	L	F	D	S	K	G	R	L	T	G	T	I	A	L	A	C	P	V	E	.	Q	T	T	A	A	D	L	P	L	T	L	A	I	A	R	E	V	G	N	L	L	L	T	D	S
Query Conservation		.	.	.	.	.																																						.
Alig confidence		.	.	.	.	.																					.																	.
Template Conservation																											.
Template Sequence		T	Q	D	N	F	Y	E	K	Q	Y	L	A	I	L	D	L	K	S	I	L	V	I	P	I	Y	.	S	K	N	K	R	V	G	V	L	S	I	G	R	K	Q	Q	I	D	W	S	L	D	D	L	A	F	L	E	Q	L	T	D	H	L	A	V	S	I	E	N	V	E
Template Known Secondary structure		T	T				T	T						T	T	T											.		S	S											S	S																									T	T
Template Predicted Secondary structure																											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions