Job Description P76016 Confidence 99.22% Date Thu Jan 5 12:17:28 GMT 2012 Rank 59 Aligned Residues 265 % Identity 17% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		E	A	T	F	E	S	Q	H	Q	F	I	D	A	V	I	T	L	K	P	I	I	E	T	Q	G	T	S	F	I	L	L	L	H	P	V	E	Q	M	R	Q	L	M	T	S	Q	L	G	K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	L	V	R	G	G	M	R	A	V	E	F	K	V	V	E	T	D	P	S	P	Y	C	I	V	A	P	D	T	V	I	H	C	E	G	E	P	I	K	R	E	D	E	E	E	S	L	N	E	V	G	Y	D	D	I	G	G	C	R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F
Template Known Secondary structure								T	T											S	S	S	S														S			B										T				G	G	G			S												T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
					344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.
Predicted Secondary structure		.	.	.																																																																									.	.	.
Query SS confidence		.	.	.																																																																									.	.	.
Query Sequence		.	.	.	A	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y	G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	.	.	.	H	G
Query Conservation		.	.	.																																																																									.	.	.
Alig confidence		.	.	.																														.	.	.											.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																		.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	.	.	.	G	A	F	F	F	L	I	N	G	P	.	.	.	.	.	.	.	.	.	E	I	M	S	K	L	A	G	E	S	E	S	N	L	R	K	A	F	E	E	A	E	K	N	A	P
Template Known Secondary structure					T												S	T	T	S	S													.	.	.	S	S									.	.	.	.	.	.	.	.	.				T	S		T	T																S	S	S
Template Predicted Secondary structure																																		.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.										.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.												.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Query Sequence		G	T	L	F	L	E	K	I	E	Y	L	A	V	E	.	.	.	.	.	.	.	.	.	.	.	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	.	.	.	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																			.	.	.											.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	.	.	.	.	.	.	.	.	.	L	K	Q	R	A	H	V	I	V	M	A	A	T	N	R	P	N	S	I	D	P	A	L	R	R	F	G	R	F	D	R	.	.	.	.
Template Known Secondary structure								S	G	G	G	T		B		S	S	S																				.	.	.	.	.	.	.	.	.	S		G	G	G									S		G	G	G	B		G	G	G	G	S	T	T	S	S			.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.										.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L	V	S	C	A	W	P	G	N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.														.	.	.	.											.	.									.													.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.														.	.	.	.											.	.									.													.	.	.	.
Template Sequence		.	.	.	E	V	D	I	G	I	P	D	A	T	G	R	L	.	.	.	.	E	I	L	Q	I	H	T	K	N	M	.	.	K	L	A	D	D	V	D	L	.	E	Q	V	A	N	E	T	H	G	H	V	G	.	.	.	.	A	D	L	A	A	L	C	S	E	A	A	L	Q	A	I	R	K	K	M	D	L	I	D
Template Known Secondary structure		.	.	.														.	.	.	.							S	T	T	S	.	.		B		T	T				.								T	T				.	.	.	.																		T	T	T	S
Template Predicted Secondary structure		.	.	.														.	.	.	.											.	.									.													.	.	.	.
Template SS confidence
					366	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.			.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.					.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
													555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	D	N	G	R	I	R	V	S	D	L	P	E	H	L	F	T	E	Q	A	T	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	D	E	T	I	D	A	E	V	M	N	S	L	A	V	T	M	D	D	F	R	W	A	L	S	Q	S	N	P	S	A
Template Known Secondary structure		T	T	S	S	S											B
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions