Job Description P76016 Confidence 99.18% Date Thu Jan 5 12:17:28 GMT 2012 Rank 66 Aligned Residues 215 % Identity 17% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.												.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	.	.	.	N	A	T	F	I	R	V	V	G	S	E	L
Template Known Secondary structure		S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	.	.	.	T								G	G	G	S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.															.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	H	G	G	T	L	F	L	E	K	I	E	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.
Template Sequence		V	K	K	F	I	.	.	.	.	.	.	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	.	.	.	.	.	.	.	.	.	F	D
Template Known Secondary structure					S	T	.	.	.	.	.	.	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	S	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure							.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.										.	.
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.				.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		I	P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	.	.	.	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R
Query Conservation																																	.	.	.
Alig confidence														.	.	.	.	.	.	.													.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	G	D	V	K	I	I	G	A	T	N	.	.	.	.	.	.	.	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	T	R	K	.	.	.	.	.	.	.	.	.	.	.	M	N	L	A	E	D	V	N	L	E	E
Template Known Secondary structure		S	S	S	S								S	.	.	.	.	.	.	.	S	G	G	G	B						S	T	T	S																						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	S		B		S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.								.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.												.	.	.	360	.	.	.	.	.	.	.
		531	.	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.				.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure										.																	.	.	.
Query SS confidence										.																	.	.	.
Query Sequence		L	V	S	C	A	W	P	G	.	N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	.	.	.	D	N	G	R	I	R	V	S	D	L	P	E	H	L	F	T
Query Conservation										.																	.	.	.
Alig confidence				.						.																	.	.	.
Template Conservation				.
Template Sequence		I	A	.	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E	K
Template Known Secondary structure				.	T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure				.
Template SS confidence
		368	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions