Job Description P76016 Confidence 95.26% Date Thu Jan 5 12:17:28 GMT 2012 Rank 241 Aligned Residues 81 % Identity 11% Template c3gecA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:period circadian protein; PDBTitle: crystal structure of a tandem pas domain fragment of2 drosophila period Resolution 4.00 Å

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		213	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		D	D	G	V	I	S	W	D	.	E	Q	G	N	L	Q	F	I	N	A	Q	A	A	R	V	L	R	L	D	A	T	A	S	Q	G	R	A	I	T	E	L	L	T	L	P	A	V	L	Q	Q	A	I	K	Q	A	H	P	L	K	H	V	E	A	T	F	E	S	Q	H	Q	F	I	D	A	V	I	T	L	K	P	I
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		D	S	F	C	C	V	I	S	M	H	D	G	I	V	L	Y	T	T	P	S	I	T	D	V	L	G	Y	P	R	D	M	W	L	G	R	S	F	I	D	F	V	H	L	K	D	R	A	T	F	A	S	Q	I	T	T	G	I	S	T	F	C	V	M	L	R	R	Y	R	G	S	Y	E	P	F	R	L	G	L	T	F
Template Known Secondary structure										S	S					S				T	T					T	S	S						S	S	S		G	G	G	S	B		T	T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		292	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions