Job Description P76016 Confidence 96.98% Date Thu Jan 5 12:17:28 GMT 2012 Rank 177 Aligned Residues 135 % Identity 9% Template c3dbaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c Resolution 2.57 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																											.	.																																																					.
Query SS confidence																											.	.																																																					.
Query Sequence		T	L	G	Q	A	A	L	E	D	A	W	E	Y	M	A	P	R	E	C	A	L	F	I	L	D	.	.	E	T	A	C	I	L	S	R	N	G	D	P	Q	T	L	Q	Q	L	S	A	L	G	F	N	D	G	T	Y	C	A	E	G	I	I	G	T	C	A	L	S	L	A	A	I	S	G	Q	A	V	K	T	M	.
Query Conservation																											.	.																																																					.
Alig confidence																											.	.																																																					.
Template Conservation
Template Sequence		K	I	V	H	K	T	L	Q	R	L	S	Q	L	L	A	A	D	R	C	S	M	F	I	C	R	S	R	N	G	I	P	E	V	A	T	R	L	L	N	V	T	P	T	S	K	F	E	D	N	L	V	N	P	D	K	E	T	V	F	P	L	D	I	G	I	A	G	W	V	A	H	T	K	K	F	F	N	I	P	D
Template Known Secondary structure																T												S	S	S	S												T	T							B			G	G	G						T	T	S	S									T						S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
										132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.	.	.	.	.																																							.	.
Query SS confidence		.	.	.	.	.	.	.	.																																							.	.
Query Sequence		.	.	.	.	.	.	.	.	A	D	Q	H	F	K	Q	V	L	W	N	W	A	F	C	A	T	P	L	F	D	S	K	G	R	L	T	G	T	I	A	L	A	C	P	V	E	Q	.	.	T	T	A	A	D	L	P	L	T	L	A	I	A	R	E	V	G	N	L	L	L
Query Conservation		.	.	.	.	.	.	.	.																																							.	.
Alig confidence		.	.	.	.	.	.	.	.																						.																	.	.
Template Conservation																															.
Template Sequence		V	K	K	N	N	H	F	S	D	Y	L	D	K	K	T	G	Y	T	T	V	N	M	M	A	I	P	I	T	Q	.	G	K	E	V	L	A	V	V	M	A	L	N	K	L	N	A	S	E	F	S	K	E	D	E	E	V	F	K	K	Y	L	N	F	I	S	L	V	L	R
Template Known Secondary structure		T	T	S	S	T	T																								.	T	T												S	S	S	S	S																				T
Template Predicted Secondary structure																															.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions