Job Description P76016 Confidence 96.07% Date Thu Jan 5 12:17:28 GMT 2012 Rank 211 Aligned Residues 130 % Identity 12% Template c3bjnA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, putative; PDBTitle: crystal structure of c-terminal domain of putative transcriptional2 regulator from vibrio cholerae, targeted domain 79-240 Resolution 1.65 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	K	A	M	L	T	L	G	Q	A	A	L	E	D	A	W	E	Y	M	A	P	R	E	C	A	L	F	I	L	D	E	T	A	C	I	L	S	R	N	G	D	P	Q	T	L	Q	Q	L	S	A	L	G	F	N	D	G	T	Y	C	A	E	G	I	I	G	T	C	A	L	S	L	A	A	I	S	G	Q	A	V	.
Query Conservation																																																																																	.
Alig confidence																																																								.	.	.	.	.	.	.																			.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		S	Q	H	N	L	D	A	V	E	A	V	L	S	R	L	Q	K	Q	T	G	E	X	A	A	Y	X	V	P	V	G	Y	R	A	L	C	V	S	Q	R	E	S	X	Q	A	L	R	C	S	F	V	Q	G	Q	S	.	.	.	.	.	.	.	Q	P	L	L	R	G	A	S	S	K	V	X	L	A	Y	X	P	A	A
Template Known Secondary structure		T	S	T	T																S	S									T	T											S	S					S			T	T			.	.	.	.	.	.	.			T	T	S											S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
																								129	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	M	A	D	Q	H	F	K	Q	V	L	.	.	.	.	W	N	W	A	F	C	A	T	P	L	F	D	S	K	G	R	L	T	G	T	I	A	L	A	C	P	V	E	Q	T	T	A	A	D	L	P	L	T	L	A	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.													.
Template Conservation																																																				.
Template Sequence		R	C	E	K	I	L	R	Y	F	G	E	D	P	T	L	D	K	W	Q	S	E	F	E	K	I	R	R	H	G	Y	A	V	S	T	S	E	I	D	P	G	V	S	G	I	S	A	P	V	X	K	.	G	S	K	L	I	G	A	I	S	V	X	A	P	A	H	R	V	E	S	N	K	Q	R	I	I	L	H	V	L
Template Known Secondary structure										T	T			T	T	S														T	S					S	S	S	S	T	T											.	T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		183	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	A	R	A
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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