Job Description P76016 Confidence 99.31% Date Thu Jan 5 12:17:28 GMT 2012 Rank 54 Aligned Residues 217 % Identity 18% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.											.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	.	.	.	.	.	.	.	.	.	.	R	Q	A	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y
Query Conservation																										.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																																.	.	.												.
Template Conservation																																																																			.	.	.												.
Template Sequence		G	G	A	K	V	E	W	T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	.	.	.	S	A	T	F	L	N	I	S	A	A	S	.
Template Known Secondary structure			S	S				G	G	G	S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													T	.	.	.	T								S	T	T	.
Template Predicted Secondary structure																																																																			.	.	.												.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.	550	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.	.	.	.	.	.	.							.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.														.	.	.	.	.	.
Query SS confidence																														.	.	.														.	.	.	.	.	.
Query Sequence		G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	.	.	.	H	G	G	T	L	F	L	E	K	I	E	Y	L	.	.	.	.	.	.	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V
Query Conservation																														.	.	.														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																					.	.	.														.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	T	S	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	R	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	S	S	S	S		S																T		S							T	G	G	G	T	S	B					S													.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.													.	.	.	610	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L	V	S	C	A	W	P	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.																	.									.	.													.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.																	.									.	.													.	.	.	.	.	.
Template Sequence		V	V	L	A	A	T	N	.	.	.	.	.	.	.	R	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	.	V	Y	V	S	L	P	D	E	.	.	Q	T	R	E	L	L	L	N	R	L	L	Q	.	.	.	.	.	.	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y
Template Known Secondary structure								S	.	.	.	.	.	.	.		G	G	G	B												.									.	.												G	.	.	.	.	.	.	G	G	S			S												T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.																	.									.	.													.	.	.	.	.	.
Template SS confidence
		623	.	.	.	.	.	.								630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.		.	.	.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.	.	.							.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.								.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	.	.	.	.	.	.	.	D	N	G	R	I	R	V	S	D	L	P	E	H	L	F	T	E	Q	A	T
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K	R	I	R	R	S
Template Known Secondary structure														T	T					T																		T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions