Job Description P76016 Confidence 95.46% Date Thu Jan 5 12:17:28 GMT 2012 Rank 232 Aligned Residues 61 % Identity 15% Template c2wjyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form Resolution 2.50 Å

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		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		R	L	I	H	F	G	R	Q	A	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	.	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y	G	D	A	A	L	A	E	E	F
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		H	S	Q	V	Y	A	V	K	T	V	L	Q	R	P	L	S	L	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L	A	R	Q	G	N	G	P	V	L	V	C	A	P	S	N	I	A	V	D	Q	L	T	E	K	I
Template Known Secondary structure													T	S	S								T	T	S															T	T		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions