Job Description P76016 Confidence 95.97% Date Thu Jan 5 12:17:28 GMT 2012 Rank 215 Aligned Residues 141 % Identity 11% Template c2veaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phytochrome-like protein cph1; PDBTitle: the complete sensory module of the cyanobacterial2 phytochrome cph1 in the pr-state. Resolution 2.21 Å

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		212	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		M	D	D	G	V	I	S	W	D	.	E	Q	G	N	L	Q	F	I	N	A	Q	A	A	R	V	L	R	L	D	A	T	A	S	Q	G	R	A	I	T	E	L	L	T	L	P	A	V	L	Q	Q	A	I	K	Q	A	H	P	L	K	H	V	E	A	T	F	E	S	Q	H	Q	F	I	D	A	V	I	T	L	K	P
Query Conservation											.
Alig confidence											.																																																					.	.	.															.
Template Conservation																																																																.	.	.															.
Template Sequence		P	H	G	L	V	V	V	L	Q	E	P	D	L	T	I	S	Q	I	S	A	N	C	T	G	I	L	G	R	S	P	E	D	L	L	G	R	T	L	G	E	V	F	D	S	F	L	T	A	G	Q	I	S	S	L	N	P	S	K	L	W	A	R	.	.	.	V	M	D	F	V	I	F	D	G	V	F	H	R	N	.
Template Known Secondary structure		T	T	S							T	T	T	T							T	T					T	S			T	T	T	S	S	T	T	T	T	T	T	T	S	B						T	T					S	S							.	.	.															.
Template Predicted Secondary structure																																																																.	.	.															.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		I	I	E	T	Q	G	T	S	F	I	L	L	L	H	P	V	E	Q	M	R	Q	L	M	T	S	Q	L	G	K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	A	R	S	S	.	F	P	V	L	L	C	G	E	E	G	V	G
Query Conservation																																																												.
Alig confidence		.	.	.	.																																																							.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	D	G	L	L	V	C	E	L	E	P	A	Y	T	S	D	N	L	P	F	L	G	F	Y	H	M	A	N	A	A	L	N	R	L	N	L	R	D	F	Y	D	V	I	V	E	E	V	R	R	M	T	G	F	D	R	V	M	L	Y	R	F	D	E	N	N	H	G
Template Known Secondary structure		.	.	.	.	S	S												T	T	S			S	T	T	T	T	T																														S									T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions