Job Description P76016 Confidence 99.23% Date Thu Jan 5 12:17:28 GMT 2012 Rank 57 Aligned Residues 215 % Identity 20% Template c2r65A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex Resolution 3.30 Å

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.											.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	.	.	.	.	.	.	.	.	.	.	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y	G
Query Conservation																												.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																													.	.	.												.	.
Template Conservation																																																																		.	.	.												.	.
Template Sequence		K	P	N	V	R	F	K	D	M	A	G	N	E	E	A	K	E	E	V	V	E	I	V	D	F	L	K	Y	P	E	R	Y	A	N	L	G	A	K	I	P	K	G	V	L	L	V	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	G	E	A	.	.	.	H	V	P	F	F	S	M	G	G	S	S	.	.
Template Known Secondary structure							G	G	G	S		S							T	T									S						T	T	T					S							S	S	S	S	S													.	.	.	T								T	G	G	.	.
Template Predicted Secondary structure																																																																		.	.	.												.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.	.	.	.	.	.	.						.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																													.	.	.														.	.	.	.	.
Query SS confidence																													.	.	.														.	.	.	.	.
Query Sequence		D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	.	.	.	H	G	G	T	L	F	L	E	K	I	E	Y	L	.	.	.	.	.	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V	K	V
Query Conservation																													.	.	.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																					.	.	.														.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	F	I	E	M	F	V	G	L	G	A	S	R	V	R	D	L	F	E	T	A	K	K	Q	A	P	S	I	I	F	I	D	E	I	D	A	I	G	K	N	D	E	R	E	Q	T	L	N	Q	L	L	A	E	M	D	.	.	.	.	.	.	.	.	G	F	G	S	E	N	A	P	V	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	G	G	S			S	S	S		S	T	T											T		S						T	T	G	G	G	T						S	T	T	T	S	S	S					T	T	.	.	.	.	.	.	.	.			S		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template SS confidence
									239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.									.	.	.	.	.	.	.	300	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L	V	S	C	A	W	P	G	N	D
Query Conservation
Alig confidence								.	.																	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	T	N	R	.	.	P	E	I	L	D	P	A	L	M	R	P	G	R	F	D	R	.	.	Q	V	L	V	D	K	P	D	F	N	G	R	V	E	I	L	K	V	H	I	.	.	.	.	.	.	.	.	.	.	.	K	G	V	K	L	A	N	D	V	N	L	Q	E	V	A	K	L	T	A	G	L	A	G
Template Known Secondary structure						S		.	.	T	T	S	S		G	G	G	G	S	T	T	S	S			.	.						S															.	.	.	.	.	.	.	.	.	.	.	T	T	S				S													S			S
Template Predicted Secondary structure								.	.																	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.												.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.				.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		F	E	L	Y	S	V	I	E	N	L	A	L	S	S	.	.	.	D	N	G	R	I	R	V	S	D	L	P	E	H	L
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		A	D	L	A	N	I	I	N	E	A	A	L	L	A	G	R	N	N	Q	K	E	V	R	Q	Q	H	L	K	E	A	V
Template Known Secondary structure																					S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions