Job Description P76016 Confidence 91.80% Date Thu Jan 5 12:17:28 GMT 2012 Rank 435 Aligned Residues 104 % Identity 16% Template c2qeqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns3 catalytic subunit; PDBTitle: crystal structure of kunjin virus ns3 helicase Resolution 3.10 Å

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		351	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.										.	410	.	.
Predicted Secondary structure														.																																															.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.
Query SS confidence														.																																															.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.
Query Sequence		V	L	L	C	G	E	E	G	V	G	K	A	.	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y	G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	.	.	.	.	.	.	.	.	.	L	S	R	L	.	.	.	.	.	.	.	.
Query Conservation														.																																															.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.
Alig confidence														.																																															.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	L	D	L	H	P	G	A	G	K	T	R	R	I	L	P	Q	I	I	K	E	A	I	N	R	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	I	R	Y	Q	T	S	A	N	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L	M	S	P	H
Template Known Secondary structure								S	S	T	T	T	T	T	T												T	T								S	S												T	T	S											S																	S	S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	H	G	G	T	L	F	L	E	K	I	E	Y	L	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V	K	V	I	A	T	T
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	S	T	.	.	.	.	.	.	.	.	.	.	R	V	E	L	G	E	A	A	A	I	F	M	T
Template Known Secondary structure							S					S	S	T	T																.	.	.	.	.	.	.	.	.	.				T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.											.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions