Job Description P76016 Confidence 99.15% Date Thu Jan 5 12:17:28 GMT 2012 Rank 72 Aligned Residues 272 % Identity 19% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.									.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.
Predicted Secondary structure																													.	.																			.	.	.	.	.	.	.	.																		.	.
Query SS confidence																													.	.																			.	.	.	.	.	.	.	.																		.	.
Query Sequence		F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	A	R	S	S	F	P	.	.	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	.	.	.	.	.	.	.	.	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	.	.	L	Y	G	D	A	A
Query Conservation																													.	.																			.	.	.	.	.	.	.	.																		.	.
Alig confidence																													.	.																			.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		F	K	E	I	P	F	R	E	D	I	L	R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G	T	P	Q	A
Template Known Secondary structure			S	S		T	T																	T	T												T	T	S	S																			S	S	S	S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.											.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.													.
Query Sequence		L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	.	.	.	.	.	.	.	.	.	.	H	G	G	T	L	F	L	E	K	I	E	Y	.	L	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V	K	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.													.
Alig confidence																										.	.	.	.	.	.	.	.	.	.													.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	.	.	.	.	.	.	.	.	.	.	.	S	D	A	N	I	S	V
Template Known Secondary structure													S				S	S	S	S		T												S	S	S								T	T						S	T	T	S									T	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170												.	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L	.	.	V	S	C	A	W	P	G
Query Conservation																																																																									.	.
Alig confidence											.	.	.	.																.									.	.	.	.	.	.																													.	.
Template Conservation											.	.	.	.																.									.	.	.	.	.	.
Template Sequence		I	M	I	S	N	D	I	N	V	.	.	.	.	R	D	Y	M	E	P	R	V	L	S	S	L	G	P	S	.	V	I	F	K	P	Y	D	A	.	.	.	.	.	.	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	G	L	I	K	G	T	Y	D	D	E	I	L	S	Y	I	A	A	I	S	A	K	E	H	G
Template Known Secondary structure						S	S	T	T	T	.	.	.	.	T	T	T	S							T					.									.	.	.	.	.	.														T	S		T	T	S			S												T	T
Template Predicted Secondary structure											.	.	.	.																.									.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.		.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	D	.	N	G	R	I	R	V	S	D	L	P	E	H	L	F	T	E	Q	A	T	D	D	V	S	A	T	R	L	S	T	S	L	S	F	A	E	V	E	K	E	A	I	I	N	A	A	Q	V	T	G	G	R	I	Q	E	M	S	A	L	L	G	I	G
Query Conservation																			.
Alig confidence																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	R	K	A	V	N	L	L	F	R	A	A	Q	L	A	S	G	G	G	I	I	R	K	E	H	V	D	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	D	Y	E	Q	E	R	L	I	E	A	V	K	A	L	P	F	H	Y	K	L	A	L	R	S	L	I	E	S
Template Known Secondary structure																	T	T	S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S													T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		618										.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	.	.	T	T	L	W	R	K	M	K	Q	H	G	I	D	A	G	Q	F	K	R
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	V	M	S	A	H	K	M	Y	T	D	L	C	N	K	F	K	Q	K	P	L	S	Y	R	R	F	S	D
Template Known Secondary structure			B															T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions