Job Description P76016 Confidence 97.49% Date Thu Jan 5 12:17:28 GMT 2012 Rank 152 Aligned Residues 139 % Identity 13% Template c2o0yB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. Resolution 2.00 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	A	S	I	Y	R	R	K	K	A	M	L	T	L	G	Q	A	A	L	E	D	A	W	E	Y	M	A	P	R	E	C	A	L	F	I	L	D	E	T	A	C	I	L	S	R	N	G	D	P	Q	T	L	Q	Q	L	S	A	L	G	F	N	D	G	T	Y	C	A	E	G	I	I	G	T	C	A	L	S	L	A
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		R	W	V	R	L	A	G	R	T	W	A	P	P	E	E	V	V	D	I	X	R	Q	L	S	A	D	T	G	E	T	V	N	L	Y	I	R	Q	G	L	S	R	V	V	V	A	Q	C	E	S	T	A	T	V	R	S	V	I	P	L	G	V	P	.	.	.	.	.	.	.	Y	P	L	W	A	G	A	A	G	K	I
Template Known Secondary structure		G	G																										S	S									T	T											S		S	S						T	T			.	.	.	.	.	.	.			S	S	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																														.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	S	G	Q	A	V	K	T	M	A	D	Q	H	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	L	W	N	W	A	F	C	A	T	P	L	F	D	S	K	G	R	L	T	G	T	I	A	L	A	C	P	V	E	Q	T	T	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		L	L	L	A	A	P	E	.	.	L	I	D	D	V	A	A	D	S	P	H	G	P	E	F	A	D	Q	L	R	E	K	V	E	D	G	R	E	R	G	Y	Q	L	V	H	G	E	R	E	L	G	S	S	G	L	S	F	P	L	V	D	S	H	G	T	V	V	A	A	L	T	L	G	G	P	T	G	R	F	T	E
Template Known Secondary structure			G	G	G		G	G	.	.	G								S	S	S		T	T																S	S					S	S	S	S	T	T											T	T													G	G	G	S		T
Template Predicted Secondary structure									.	.
Template SS confidence
		157	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	P	L	T	L	A	I	A	R	E	V	G	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	T	P	H	Y	I	E	C	T	R	A	A	A	E	E	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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