Job Description P76016 Confidence 97.09% Date Thu Jan 5 12:17:28 GMT 2012 Rank 173 Aligned Residues 99 % Identity 17% Template c2l4rA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2; PDBTitle: nmr solution structure of the n-terminal pas domain of herg Resolution UNK

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																			.	.	.																																				.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																				.	.	.	.	.	.	.	.
Query Sequence		L	N	A	L	L	E	S	M	D	D	G	V	I	S	W	D	E	.	.	.	Q	G	N	L	Q	F	I	N	A	Q	A	A	R	V	L	R	L	D	A	T	A	S	Q	G	R	A	I	T	E	L	L	T	L	P	A	.	.	.	.	.	.	.	.	V	L	Q	Q	A	I	K	Q	A	H	P	L	K	H	V	E	A
Query Conservation																			.	.	.																																				.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	R	K	F	E	G	Q	S	R	K	F	I	I	A	N	A	R	V	E	N	C	A	V	I	Y	C	N	D	G	F	C	E	L	C	G	Y	S	R	A	E	V	M	Q	R	P	C	T	C	D	F	L	H	G	P	R	T	Q	R	R	A	A	A	Q	I	A	Q	A	L	L	G	A	E	E	R	K	V	E	I	A
Template Known Secondary structure		T								S								T	T		S	S	S	S		S											T							T	T			T	T		G	G	G			T	T	S															T		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	E	S	Q	H	Q	F	I	D	A	V	I	T	L	K	P	I	I	E	T	Q	G	T	S	F	I	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	R	K	D	G	S	C	F	L	C	L	V	D	V	V	P	V	K	N	E	D	G	A	V	I	M	F	I	L
Template Known Secondary structure					T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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