Job Description P76016 Confidence 95.44% Date Thu Jan 5 12:17:28 GMT 2012 Rank 233 Aligned Residues 129 % Identity 16% Template c2gx5B_ PDB info PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody Resolution 1.74 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		Q	A	A	L	E	D	A	W	E	Y	M	A	P	R	E	C	A	L	F	I	L	D	E	T	A	C	I	L	S	R	N	G	D	P	Q	T	L	Q	Q	L	S	A	L	G	F	N	D	G	T	Y	.	.	.	.	.	.	C	A	E	G	I	I	G	T	C	A	L	S	L	A	A	I	S	G	Q	A	V	K	T	M
Query Conservation																																																				.	.	.	.	.	.
Alig confidence													.	.	.																																					.	.	.	.	.	.												.	.	.	.
Template Conservation													.	.	.																																																						.	.	.	.
Template Sequence		K	E	M	A	E	T	L	R	D	V	I	.	.	.	D	S	N	I	F	V	V	S	R	R	G	K	L	L	G	Y	S	I	N	Q	Q	I	E	N	D	R	M	K	K	M	L	E	D	R	Q	F	P	E	E	Y	T	K	N	L	F	N	V	P	E	T	S	S	N	.	.	.	.	L	D	I	N	S	E	T	A	F
Template Known Secondary structure													.	.	.	T	S							T	T	S	B							S	S														T	B											T			S					.	.	.	.			T	T					S
Template Predicted Secondary structure													.	.	.																																																						.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Q	H	F	K	Q	V	L	W	N	W	A	F	C	A	T	P	L	F	D	S	K	G	R	L	T	G	T	I	A	L	A	C	P	V	E	Q	T	T	A	A	D	L	P	L	T	L	A	I	A	R	E	V	G	N	L	L	L	T	D	S	L	L
Query Conservation
Alig confidence						.																.
Template Conservation						.																.
Template Sequence		P	V	E	N	.	R	D	L	F	Q	A	G	L	T	T	I	V	P	I	I	.	G	G	G	E	R	L	G	T	L	I	L	S	R	L	Q	D	Q	F	N	D	D	D	L	I	L	A	E	Y	G	A	T	V	V	G	M	E	I	L	R	E	K	A	E
Template Known Secondary structure			G	G	G	.	G	G	G	G	S	S	S									.		T	T											S	S																											T
Template Predicted Secondary structure						.																.
Template SS confidence
		99	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions