Job Description P76016 Confidence 97.16% Date Thu Jan 5 12:17:28 GMT 2012 Rank 171 Aligned Residues 132 % Identity 12% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.				.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.						.	.
Query SS confidence																																																.	.	.						.	.
Query Sequence		Q	T	R	R	L	I	H	F	G	R	Q	A	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	.	.	.	Y	I	A	V	N	.	.	C	E	L	Y	G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G
Query Conservation																																																.	.	.						.	.
Alig confidence															.	.																																.	.	.						.	.
Template Conservation															.	.
Template Sequence		Q	L	E	T	L	K	R	I	I	E	K	S	E	.	.	G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	T
Template Known Secondary structure												T		S	.	.	S								S	S	S	S															T	S				T	T	T							S	S	S		B													T	S			S	S	S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	R	L	E	L	A	H	G	G	T	L	F	L	E	K	I	E	Y	L	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I	P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		R	K	.	.	.	.	.	.	.	.	.	Y	V	I	V	H	D	C	E	R	X	T	Q	Q	A	A	N	A	F	L	K	A	L	E	E	.	.	.	.	.	.	.	.	.	.	.	P	P	E	Y	A	V	I	V	L	N	T	R	.	.	.	.	.	.	.	R	W	H	Y	L	L	P	T	I	K	S	R	V	F	R
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.					T	T	G	G	G	B								T						S	.	.	.	.	.	.	.	.	.	.	.			T	T								S	.	.	.	.	.	.	.		G	G	G	S						T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		488	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	I	T	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	N	V	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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