Job Description P76016 Confidence 99.50% Date Thu Jan 5 12:17:28 GMT 2012 Rank 38 Aligned Residues 246 % Identity 21% Template c2dhrC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) Resolution 3.90 Å

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.											.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	A	R	S	.	.	.	.	.	.	.	.	.	.	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	E	L	Y	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																										.	.	.										.	.	.	.
Template Conservation																																																																		.	.	.										.	.	.	.
Template Sequence		A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	R	V	P	F	I	T	A	S	G	.	.	.	.
Template Known Secondary structure							T	T	S	S		S																		G	G	G	T	T	T	T	S					S							S	T	T	S	S												T	.	.	.	T								G	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.										.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.				.	.	.	420	.	.	.	.	.	.	.	.	.															430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	H	.	.	.	G	G	T	L	F	L	E	K	I	E	Y	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R
Query Conservation																														.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	S	D	F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	R	G	S	G	V	G	G	G	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	G	G	G	T	S	S		T	T											T	T	S	T	T	S	S	S								G	G	G	T				S	S	S	S	T	T	T	S	S														G	G	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
							223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L
Query Conservation
Alig confidence																	.	.																	.	.														.	.	.	.								.	.	.	.	.	.	.
Template Conservation																	.	.																	.	.														.	.	.	.								.	.	.	.	.	.	.
Template Sequence		F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	.	.	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	.	.	Q	I	A	I	D	A	P	D	V	K	G	R	E	.	.	.	.	Q	I	L	R	I	H	A	.	.	.	.	.	.	.	R	G	K	P	L	A	E	D	V	D	L	A	L	L
Template Known Secondary structure				S	S										S		.	.	G	G	G	S		T	T	T	S	S	T	T	S	S			.	.														.	.	.	.						T	T	.	.	.	.	.	.	.	S	S	S					S	S	T	T
Template Predicted Secondary structure																	.	.																	.	.														.	.	.	.								.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.								340	.	.	.	.	.	.	.	.	.	350	.	.	.
		532	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.				.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure									.																	.	.	.
Query SS confidence									.																	.	.	.
Query Sequence		V	S	C	A	W	P	G	.	N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	.	.	.	D	N	G	R	I	R	V	S	D	L	P	E	H	L	F	T	E	Q	A	T	D	D	V	S	A	T	R	L	S	T	S	L	S	F	A	E	V	E	K	E	A	I	I	N	A	A	Q
Query Conservation									.																	.	.	.
Alig confidence					.				.																	.	.	.
Template Conservation					.
Template Sequence		A	K	R	.	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A	D	R	V	M	M	L	P	A	K	K	S	L	V	L	S	P	R	D	R	R	I	T	A	Y	H	E	A	G	H	A	L	A	A
Template Known Secondary structure			T	T	.	S		S																							S	S			S											T	T		S	S	S	S						T	T
Template Predicted Secondary structure					.
Template SS confidence
		354	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions