Job Description P76016 Confidence 98.67% Date Thu Jan 5 12:17:28 GMT 2012 Rank 94 Aligned Residues 238 % Identity 12% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350								.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	A	R	S	S	F	P	.	.	.	.	.	.	.	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	.	.	.	.	.	.	S	E	R	A	A	G	P	Y	I	A	V	N	C	E
Query Conservation																																		.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	N	Y	I	P	P	E	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y	V	N	A	F
Template Known Secondary structure		S	T	T				S	S		S	S	S	S																	T													T	T			S	S	S																			T	T										G	G
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.													.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.							.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		L	Y	G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	L	E	L	A	H	G	G	T	L	F	L	E	K	I	E	Y	.	.	.	.	.	.	L	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		N	A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	.	.	.	.	.
Template Known Secondary structure		G			S													T						T	T																		T									S	T					S		T	T	S										T					.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	R	R	L	I	P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A
Query Conservation
Alig confidence		.	.																																								.									.	.	.	.	.	.
Template Conservation		.	.																																								.									.	.	.	.	.	.
Template Sequence		.	.	I	P	S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	.	L	H	L	P	A	Y	K	S	.	.	.	.	.	.	R	E	L	Y	T	I	L	E	Q	R	A	E	L	G	L	R	D	T	V	W	E	P	R	H
Template Known Secondary structure		.	.	S			T	T	S													T															T	T		S			.									.	.	.	.	.	.															B		G	G	G
Template Predicted Secondary structure		.	.																																								.									.	.	.	.	.	.
Template SS confidence
				171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		528	.	530	.	.	.	.						.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.				.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure									.	.	.	.	.																						.	.	.
Query SS confidence									.	.	.	.	.																						.	.	.
Query Sequence		L	A	R	L	V	S	C	.	.	.	.	.	A	W	P	G	N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	D	.	.	.	N	G	R	I	R	V	S	D	L	P	E	H	L	F	T
Query Conservation									.	.	.	.	.																						.	.	.
Alig confidence									.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		L	E	L	I	S	D	V	Y	G	E	D	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A	E	A	M	G	R	D	S	L	S	E	D	L	V	R	K	A	V	S	E
Template Known Secondary structure											G	G	G	T	S																			G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions