Job Description P76016 Confidence 99.07% Date Thu Jan 5 12:17:28 GMT 2012 Rank 80 Aligned Residues 207 % Identity 27% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.											.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																																									.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																																									.	.	.
Query Sequence		G	K	V	S	H	T	F	A	H	M	P	Q	D	D	P	Q	T	R	R	L	I	H	F	G	R	Q	A	.	.	.	.	.	.	.	.	.	.	A	R	S	S	F	P	V	L	L	C	G	E	E	G	V	G	K	A	L	L	S	Q	A	I	H	N	E	S	E	R	A	A	G	P	Y	I	A	V	N	C	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.																																									.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																													.	.	.										.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		E	A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	R	V	P	F	I	T	A	S	G	S	D	F
Template Known Secondary structure								G	G	G	S	S	S																								T	T													T	T	S	S												T	.	.	.	T
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.
						385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.							.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure		.	.	.	.																																													.	.	.	.	.	.
Query SS confidence		.	.	.	.																																													.	.	.	.	.	.
Query Sequence		.	.	.	.	E	L	Y	G	D	A	A	L	A	E	E	F	I	G	G	D	R	T	D	N	E	N	G	R	L	S	R	L	E	L	A	H	G	G	T	L	F	L	E	K	I	E	Y	L	.	.	.	.	.	.	A	V	E	L	Q	S	A	L	L	Q	V	I	K	Q	G	V	I	T	R	L	D	A	R	R	L	I
Query Conservation		.	.	.	.																																													.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Sequence		V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	.	.	.	.	.	.	.	.	.	F	E	K
Template Known Secondary structure				S	T	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.				T	S		S							T																							T	T	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.														.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.				470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		P	I	D	V	K	V	I	A	T	T	T	A	D	L	A	.	.	.	M	L	V	E	Q	N	R	F	S	R	Q	L	Y	Y	A	L	H	A	F	E	I	T	I	P	P	L	R	M	R	R	G	S	I	P	A	L	V	N	N	K	L	R	S	L	E	K	R	F	S	T	R	L	K	I	D	D	D	A	L	A	R	L
Query Conservation																	.	.	.
Alig confidence																	.	.	.											.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		D	T	A	I	V	V	M	A	A	T	N	R	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	.	.	.	.	.	.	.	Q	I	A	I	D	A	P	D	V	K	G	R	E	.	.	.	.	.	.	.	.	Q	I	L	R	I	H	A	R	G	K	P	L	A	E	D	V	D	.	.	.	L	A	L	L
Template Known Secondary structure		T										S		T	T	S	S						S	T	T	S	S			.	.	.	.	.	.	.														.	.	.	.	.	.	.	.								T	T	S		B		T	T			.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.									.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.
		532	.	.	.	.	.	.		.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.				.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																	.	.	.
Query SS confidence									.																	.	.	.
Query Sequence		V	S	C	A	W	P	G	.	N	D	F	E	L	Y	S	V	I	E	N	L	A	L	S	S	.	.	.	D	N	G	R	I	R	V	S	D	L	P	E	H	L
Query Conservation									.																	.	.	.
Alig confidence					.				.																	.	.	.
Template Conservation					.
Template Sequence		A	K	R	.	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A
Template Known Secondary structure				T	.		T	T																				T	T			S	B									T
Template Predicted Secondary structure					.
Template SS confidence
		354	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions