Return to main results Retrieve Phyre Job Id

Job DescriptionP77481
Confidence97.72%DateThu Jan 5 12:29:44 GMT 2012
Rank118Aligned Residues148
% Identity18%Templated1mo6a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  IADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKI
Query Conservation 
  

   
 
  







  
 

     
 
   
               
     
     
  

         
Alig confidence 












































































...
Template Conservation     
 
  
 
 

 


 
 
         
  

 

 
 
         
     
        
        
...
Template Sequence  LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADML. . .
Template Known Secondary structure  B
SSS
SSSSSTT
SS



T

GGG


SS...
Template Predicted Secondary structure 
























...
Template SS confidence 















































































   57..60.........70.........80.........90.........100.........110.........120.........130...
 
   107..110.........120.........130.........140.........150......... 160.........170.......
Predicted Secondary structure 



























.........






Query SS confidence 




















































. . . . . . . . .

















Query Sequence  AKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMD. . . . . . . . . EPLSNLDAKLRVQMRAEI
Query Conservation                              



  


 




   
 




.........

 
 

      
   
Alig confidence  .........................................











.........

















Template Conservation  .........................................       






  
            
        
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IRSGALDIVVIDSVAALVPRAELEVGLQARLMSQALRKM
Template Known Secondary structure  .........................................TT

STT





Template Predicted Secondary structure  .........................................














Template SS confidence 















































































   134.....140.........150.........160.........170..
 
   178.180.........190... ......200.........210........
Predicted Secondary structure 



...






Query SS confidence 















. . .
























Query Sequence  SKLHQKLNTTMIYVTH. . . DQTEAMTMATRIVIMKDGIVQQVGA
Query Conservation    
    
 


 


...   
     


 

  
 
   
 
Alig confidence 















...
























Template Conservation    

      

 
 
       
   
     
          
Template Sequence  TGALNNSGTTAIFINQLTTGGKALKFYASVRMDVRRVETLKDGT
Template Known Secondary structure  T



TT
S

B
SS
Template Predicted Secondary structure 

























Template SS confidence 











































   180.........190.........200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions