Job Description P77481 Confidence 96.66% Date Thu Jan 5 12:29:44 GMT 2012 Rank 243 Aligned Residues 150 % Identity 14% Template c3pqcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp Resolution 1.90 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	V	F	V	G	P	S	G	C	G	K	S	T	T	L	R	M	I	A	G	L	E	E	I	S	G	G	D	L	L	I	D	G	K	R	M	N	D	V	P	A	K	A	R	N	I	A	M	V	F	Q	N	Y	A	L	Y	P	H	M	T	V	Y	D	N	M	A	F	G	L	K	M	Q	K	I	A	K	E	V	I
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	A	F	V	G	R	S	N	V	G	K	S	S	L	L	N	A	L	F	N	R	K	I	A	F	V	S	.	.	.	.	.	.	.	.	.	.	K	T	P	G	K	T	R	S	I	N	F	Y	L	V	N	S	K	Y	Y	F	V	D	L	P	G	Y	G	Y	A	K	V	S	K	K	E	R	M	L	W	K	R	L
Template Known Secondary structure								B	T	T	S	S										T	S			S				.	.	.	.	.	.	.	.	.	.	S	S													T	T	T									B	S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	R	V	N	W	A	A	Q	I	L	G	L	R	E	Y	L	K	R	K	P	G	A	L	S	G	G	Q	R	Q	R	V	A	L	G	R	A	I	V	R	E	A	G	V	F	L	M	D	E	P	L	S	N	L	D	A	K	L	R	V	Q	M	R	A	E	I	S	K	L	H	Q	K	L	N	T	T	M	I	Y	V
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		V	E	D	Y	F	K	N	R	W	S	L	Q	M	V	F	L	L	V	D	G	R	I	P	P	Q	.	D	S	D	L	M	M	V	E	W	M	K	S	L	N	I	P	F	T	I	V	L	T	K	M	D	K	V	K	M	S	E	R	A	K	K	L	E	E	H	R	K	V	F	S	K	Y	G	E	Y	T	I	I	P	T
Template Known Secondary structure										T	T										T	T	S				.													T	T										G	G	G	S		G	G	G														S	S			S
Template Predicted Secondary structure																											.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		192
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		174

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions