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Job DescriptionP77481
Confidence97.27%DateThu Jan 5 12:29:44 GMT 2012
Rank149Aligned Residues147
% Identity20%Templatec3hr8A_
PDB info PDB header:recombinationChain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40....... ..50.........60.........70.........80.........90.........100.....
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Query Sequence  IADKEFIVFVGPSGCGKSTTL. RMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQK
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Template Sequence  YPRGRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSTTSSTT

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   58.60.........70.........80.........90........
 
   106...110.........120.........130.........140.........150.........160... ......
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Query Sequence  IAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLS. . . . . . . . . . . . . . . . NLDAKL
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Template Sequence  . . . . . . HALDPVYAKNLGVDLKSLLISQPDHGEQALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARL
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   99100.........110.........120.........130.........140.........150.........160.........170..
 
   170.........180.........190....... ..200.........210........
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Query Sequence  RVQMRAEISKLHQKLNTTMIYVTHDQTE. . . . . . . . . . . . . . . . AMTMATRIVIMKDGIVQQVGA
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Template Sequence  MSQALRKIAGSVNKSKAVVIFTNQIRMKIGVMFGSPETTTGGLALKFYATMRMEVRRGEPIKEGK
Template Known Secondary structure  TSS
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   173......180.........190.........200.........210.........220.........230.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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