Return to main results Retrieve Phyre Job Id

Job DescriptionP77481
Confidence100.00%DateThu Jan 5 12:29:44 GMT 2012
Rank40Aligned Residues212
% Identity24%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10...... ...20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


.




























Query SS confidence 













.
































































Query Sequence  QLSLQHIQKIYDNQ. VHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMV
Query Conservation   
    
       .   
  

  
  

   
 
  







  
 

     
 
   
               
Alig confidence 













.
















































...........




Template Conservation 

    
   
      

  

  
  

   
 
 








  
 
   
  
 
   
........... 
   
Template Sequence  SITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG. . . . . . . . . . . SVAYV
Template Known Secondary structure 
S
TTS

S
TT

STTSSTT
S
S...........
Template Predicted Secondary structure 





























...........




Template SS confidence 















































































   643......650.........660.........670.........680.........690.........700...... ...710.
 
   82.......90.........100.........110.........120.... .....130.........140.........150.......
Predicted Secondary structure 






























....














Query SS confidence 










































. . . .
































Query Sequence  FQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGL. . . . REYLKRKPGALSGGQRQRVALGRAIVREAGVFL
Query Conservation       
     
  

                           ....          



  


 




   
 


Alig confidence 


.






































....
































Template Conservation   
 .      

   
                                         

 

  

 

 

   
 


Template Sequence  PQQ. AWIQNDSLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYL
Template Known Secondary structure 
SS.



STTS


TTTT
TTSTTGGGSSTTSB




S
Template Predicted Secondary structure 


.











































Template SS confidence 















































































   712.. .....720.........730.........740.........750.........760.........770.........780.........790
 
   158.160.........170.........180. ........190.........200.........210.........220.......
Predicted Secondary structure 






.













Query SS confidence 























.













































Query Sequence  MDEPLSNLDAKLRVQMRAEISKLH. QKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPA
Query Conservation 



 
 

      
   
  
 .   
 


 


   
     


 

  
 
   
    
   
 
Alig confidence 























.


















.

























Template Conservation 




 


      
   
          


  

       . 
 
  
  
 
   
    
     
Template Sequence  FDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQ. VDVIIVMSGGKISEMGSYQELLARDG
Template Known Secondary structure  STTTTS
TTSTTSTTTTS
S
STTGGG.SSTT
TS
Template Predicted Secondary structure 














.







Template SS confidence 






































































   791........800.........810.........820.........830.... .....840.........850.........860
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions