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Job DescriptionP77481
Confidence100.00%DateThu Jan 5 12:29:44 GMT 2012
Rank7Aligned Residues341
% Identity33%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVF
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Template Sequence  TIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVF
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TTSTT

TT

STTSSTSS

STT
TT

GGGSS
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  QNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPL
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Template Sequence  QNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPF
Template Known Secondary structure  TT



TTS
TTGGGTT

TT
GGGTTS
GGGS
TT

SSTT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  SNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNF
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Template Sequence  AAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES. . NV
Template Known Secondary structure  TTS


S

STT
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   174.....180.........190.........200.........210.........220.........230.........240......... 250.
 
   243......250.........260.........270.........280.........290.........300.........310........ .320.
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Query Sequence  IRGTIDGDKFVTETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTV. GGH
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Template Sequence  WTRAVQNGRIEVAGAALP. . . . . . . . VDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGE
Template Known Secondary structure 
BTTSSS
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TTS
TT

GGG

TTT
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   252.......260......... 270.........280.........290.........300.........310.........320...
 
   322.......330.........340.........350...
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Query Sequence  ELVVRAGALNDYHAGENITIHFDMTKCHFFDA
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Template Sequence  VWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
Template Known Secondary structure  GGGTTT

TT




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   324.....330.........340.........350.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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